Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq2577 93.3 9e-15 >seq2577 Length=10119 Score = 93.3 bits (102), Expect = 9e-15 Identities = 202/300 (67%), Gaps = 2/300 (1%) Strand=Plus/Minus Query 25041 GAAATTTCGAAATCACTTAAATCCATGGCGAAAGAATTT-AATTGTCCAATGATCGCGTT 25099 |||||||| || || ||| | |||| |||||||| || || || || |||| | Sbjct 6167 GAAATTTCCCGTTCTCTCAAAGCATTGGCAAAAGAATTGCAAGTG-CCTGTGGTCGCACT 6109 Query 25100 ATCACAGCTTAACCGAGGTCTTGAAAACAGACAGGATAAGCGCCCAATTAACTCAGACTT 25159 || ||||||||||| |||| || | || ||| || ||||| | ||||| ||| | Sbjct 6108 CTCTCAGCTTAACCGTAGTCTGGAGCAGCGAGCGGACAAACGCCCGGTCAACTCCGACCT 6049 Query 25160 GCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCGCATTGATATACCGAGACGA 25219 ||| || || || | || || ||||||||||| || || || || || || || || Sbjct 6048 GCGTGAATCCGGATCTATCGAGCAGGATGCTGACCTGATTATGTTTATCTATCGTGATGA 5989 Query 25220 AGTGTATAACCCCGACAGCTCTGACAAAGGCATTGCCGAGATTATCATTGGCAAACACAG 25279 || ||| | ||||| | ||||||||||| ||||||||| | || ||||| | Sbjct 5988 GGTTTATCATGAAAACAGCGATTTGAAAGGCATTGCTGAGATTATCTTGGGGAAACAGCG 5929 Query 25280 GAATGGCGAGCTAGGCACAGTGAGAGCGGCATTCATTGGGCAGTACACGCGATTTGAAAA 25339 || ||| | || || || | | | |||| ||||||| |||| ||||| || Sbjct 5928 TAACGGCCCTATCGGTACCGTTCGGTTGACCTTCAACGGGCAGTGGTCGCGTTTTGATAA 5869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101524815925248