Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq2351 571 4e-158 seq3821 149 4e-31 seq3556 127 1e-24 seq3070 100 2e-16 seq3482 95.1 8e-15 seq3868 86.0 4e-12 >seq2351 Length=10305 Score = 571 bits (632), Expect = 4e-158 Identities = 1150/1687 (68%), Gaps = 64/1687 (4%) Strand=Plus/Plus Query 68405 ACGCGTCTGGAGATGGTTAAGGGCTTCTACGATGTGACCAGTACATTCAAGTTGTCTCTG 68464 ||||||||||| || || ||||||| || | || ||| |||||| | || || Sbjct 2529 ACGCGTCTGGATTACGTCAAACGCTTCTATGACGCGATTTCTACCTTCAAGATTTCATTG 2588 Query 68465 CCAACGCCAATTATGGCCGGCGTGCGCACCCCTACTCGCCAGTTCTCCAGCTGCGTGCTG 68524 |||||||| || ||| |||||||||| ||||| || || |||||| | ||||||| || Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 68525 ATTGAA-GCTGCTGATAGTCTGAAAGGGATTAGCGCTGCGTCTTCCGCAATCATCGACTA 68583 ||||| || || || || ||| | |||| ||| | || || ||| | | || Sbjct 2649 ATTGAGTGCGGC-GACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATA 2707 Query 68584 CGTGTCACGTCGCGCGGGCATTGGTATTGGCTTTGGGCGTCTGCGTGCGCTGGGCAGTGA 68643 ||| |||| || || || || || ||| | || ||| | ||||||||||| || Sbjct 2708 CGTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCC 2767 Query 68644 GATCCGCAATGGCGAGGCCACCCACACTGGCGTTTTTCCATTCCTGAAACACTTCCAGAC 68703 ||| ||| ||| || || ||| |||||| | |||| ||| ||||| |||||||| Sbjct 2768 GATTCGCGGTGGTGAAGCATTCCATACTGGCTGTATTCCTTTCTATAAACATTTCCAGAC 2827 Query 68704 GGCGGTGAAATCCTGCTCTCAGGGCGGTGTTCGCGGCGGCGCTGCTACAGCGTTCTATCC 68763 || |||||||||||||| ||||||||||| |||||||| || || || ||| || || Sbjct 2828 CGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTACCC 2887 Query 68764 GATCTGGCACTTGGAAGTTGAAAGTCTGCTGGTGCTGAAAAACAACCGTGGCATTGAAGA 68823 | | ||||| ||||||| ||||| |||||||||||||| |||||||||||| | |||| Sbjct 2888 GCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGAAGG 2947 Query 68824 GAACCGCGTTCGTCATCTCGACTATGGCGTGATGATCAACCGTCTGATGTATCGCCGCCT 68883 |||||||| ||||| ||||| || |||||| | | ||| |||||||||| ||||| Sbjct 2948 CAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCGCCT 3007 Query 68884 GGTGCGCAACG---AAAACATTACGCTGTTCAGCCCACACGATGTGCCGGGCCTGTACGA 68940 ||| ||| | || | || || ||||||||||| || || || |||||||| || Sbjct 3008 GGT---CAAAGGACAAGAAATCACCCTGTTCAGCCCCTCTGACGTACCCGGCCTGTATGA 3064 Query 68941 CGCGTTCTTTGTTGATCAGGACAAGTTCGAAGAGCTGTACCTGAAGTACGAAGCCGACGA 69000 ||| || || | |||||||| |||||||| | || | | |||| ||| ||||| Sbjct 3065 CGCATTTTTCGCCGATCAGGATGAGTTCGAACGCTTATATCAGCAGTATGAAAAAGACGA 3124 Query 69001 GAGCATCCGTAAGAAATCTATCCCGGCCGTCGACCTGTTCTCTACGCTGATGCAGGAGCG 69060 |||||||| |||||||| || || ||||| |||||||| | ||||||| || || Sbjct 3125 CAGCATCCGCAAGAAATCCATGAAAGCGGTCGATCTGTTCTCGCTGATGATGCAAGAACG 3184 Query 69061 TGCCTCCACTGGTCGTGTTTATATTGCCAACGTCGACCACATGAACGATCACGGCGCATT 69120 ||||| || || ||| | || ||| | ||||| || ||| ||| || | || Sbjct 3185 CGCCTCTACCGGCCGTATCTACATTCAGCATGTCGATCATTGCAACACCCACAGCCCGTT 3244 Query 69121 CGTTCCGGAAATTGCACCGGTACACCAGTCCAATCTCTGTATGGAGATCACGCTACCGAC 69180 | ||| || ||||| || | |||||||| || || |||| || |||| || || Sbjct 3245 TGAACCGACCATCGCACCAGTGCGTCAGTCCAACCTGTGCCTGGAAATTGCGCTGCCAAC 3304 Query 69181 CAAGCCACTGG----CGTTCACTGACGATCCGAACGGGGAAATCGCGCTTTGCACCCTGT 69236 | | || || || ||| ||||| || || || |||||||| |||||||| | Sbjct 3305 CCACCCTGAGGAAGACG-TCAACGACGA---AAAAGGTGAGATCGCGCTCTGCACCCTCT 3360 Query 69237 CTGCGTTCAACCTGGGCGCGATCCGCACGCTGGACTCACTGAAAGACGTGGCGTTTTACG 69296 | ||||||||||| ||||| | | ||||| || |||| ||||| | | Sbjct 3361 CCGCGTTCAACCTTGGCGCATTGAATAGCCTGGATGATTTGGAAGATTTGGCGCGTCTGG 3420 Query 69297 CTGTGGCGGCACTGGACTCTCTGCTCGACTATCAGGACTACCCTATGGCTGCTGCAGAAA 69356 | || || |||||| | ||| | |||||||| || ||||| || || || || Sbjct 3421 CAGTACGTGCGCTGGACGCCCTGTTGGACTATCAAGATTACCCGATTCTGGCCGCCAAAC 3480 Query 69357 TCCCGGCTAAAGCTCGTCGTAGTCTGGGTATTGGCGTGACCAACTTTGCTTACTATCTGG 69416 | |||| | || || | || || || ||||| | ||||||||| |||||||||| Sbjct 3481 GCGGTGCTATGGGCCGCCGCACGCTCGGCATCGGCGTTATCAACTTTGCCTACTATCTGG 3540 Query 69417 CGAAGAACGGCTTTAACTACTCTGACGCTGCGGGCAACCAGCTGGTGCATGAGACCTTCG 69476 |||| |||||| || |||||| || | | |||| | ||| ||| ||||||| | Sbjct 3541 CGAAAAACGGCGTTCGCTACTCCGATGGCAGTGCCAACAATCTGACGCACAAGACCTTTG 3600 Query 69477 AAGCCATTCAGTACTACCTGCTCGATGCGAGCTGC---CGA-CTGGCCGAAGCGA--AAG 69530 ||||||||||||||||||||| ||| ||| | ||| ||||| |||| | | Sbjct 3601 AAGCCATTCAGTACTACCTGC----TGCAAGCCTCAAACGAGCTGGC--GCGCGAACAGG 3654 Query 69531 GTGCATGTGACTGGTTCTCCCACACCAAATACGCACAGGGCCAGCTGCCAGTCGACCACT 69590 |||| || ||||| ||| || | || || | ||| |||||| | ||| || Sbjct 3655 GTGCCTGCCCGTGGTTTGACCAAACTACCTATGCCCGTGGCGTGCTGCCTATTGACACCT 3714 Query 69591 ATCGCAAAACGCTGGATACCAACCCGGA-GACATCTTTCGAGCTGAA------AATGCCG 69643 | |||||| ||| | ||| | || ||| ||| ||| || || Sbjct 3715 A----CAAACGC--GAT------CTGGACGGCA--TTTGCAGC-GAACCGTTGCATTACG 3759 Query 69644 --TGGGAAGAGCTGCGTGGCCGTATCCGTGAGCATGGTCTGCGTAACTCAACTCTGACCG 69701 ||||||| ||||| | | ||||| || ||||| |||||||| || || | | Sbjct 3760 ATTGGGAAGCACTGCGCGACAGTATCAAAACACACGGTCTACGTAACTCCACGCTCTCTG 3819 Query 69702 CTCAAATGCCGTGTGAGACGTCCAGCCAGATCACCAACTCCACCAATGGTATTGAGCCGC 69761 | ||||||| || || || || || ||||| ||||||| ||||| || || | Sbjct 3820 CGTTGATGCCGTCGGAAACCTCGTCACAAATTTCCAACGCCACCAACGGTATCGAACCAC 3879 Query 69762 CCCGCGGCC----CGGTATCCGTGAAGTCTTCCAAAGACGGCATCGTGAAGATGGTCGTT 69817 | ||||| | | ||||| ||| | || ||||||||||| || ||| || Sbjct 3880 CACGCGGTCACATCAGTATC----AAGGCGTCAAAAGACGGCATTTTGCGCCAGGTGGTG 3935 Query 69818 CCAGACTTCGCTCAACTGAAAGACCAGTACGAGTACCTGTGGGATATGCCGGATAACCGC 69877 || || | || ||||| || ||||| | |||||||| |||||| | || | Sbjct 3936 CCGGATTACGAAACCCTGAAGGATGCCTACGAATTACTGTGGGAAATGCCGAACAATGAC 3995 Query 69878 GGCTATCTG--ACTAAGGTGGCCATCATTCAGAAGTTCTTCGATCAGGCCATCTCTGCGA 69935 ||||| ||| ||| ||| | | || |||||||| |||||||||| || ||||| | Sbjct 3996 GGCTACCTGCAACT--GGTTGGGCTGATGCAGAAGTTTGTCGATCAGGCTATTTCTGCCA 4053 Query 69936 ACACCAACTACGACCCGACTCGCTTCCCTGGCGACAAGGTTCCAATGATGAAGCTGCTGG 69995 ||||||||||||| ||| | |||||||| | || || || |||| || ||||| Sbjct 4054 ACACCAACTACGATCCGGCGCGCTTCCCGTCAGGAAAAGTGCCGATGAAACAGTTGCTGA 4113 Query 69996 AAGATCTGCTGTTTGCGTATCAGCAAGGTGTGAAGACGCTTTATTACCACAACACGCGTG 70055 || |||| || ||| || || |||| ||||| ||||| || ||||| |||| Sbjct 4114 CTGACTTGCTTACCGCCTATAAGTTCGGGTTGAAAACGCTGTATTATCAAAACACCCGTG 4173 Query 70056 ATGGCGC 70062 | || || Sbjct 4174 ACGGTGC 4180 Score = 183 bits (202), Expect = 2e-41 Identities = 285/403 (71%), Gaps = 11/403 (3%) Strand=Plus/Plus Query 70308 GGAACCTATGTTCCTCGGCCAGTCTGTCAACGTAGCACGCTACGATCAGCAAAAGTACCG 70367 |||||| |||||| | || ||||| || |||||||| || |||||||||||||| || Sbjct 4384 GGAACCGATGTTCTTTGGTCAGTCCGTTAACGTAGCGCGTTACGATCAGCAAAAATA--- 4440 Query 70368 TGAC---TTCGAAAAGCTGATTGAAAAACAACTTTCGTTCTTCTGGCGCCCTGAAGAAGT 70424 ||| ||||| |||||||| || ||||| || || || |||||||| || ||||| || Sbjct 4441 TGAAATATTCGAGAAGCTGATAGAGAAACAGCTCTCCTTTTTCTGGCGTCCAGAAGAGGT 4500 Query 70425 CGACATTACCACTGACCGCATCGACTTCAATACCAAGCTGCAAGAGCACGAGCGCCATAT 70484 || | | || |||||||||| | | ||| | ||| || || || || Sbjct 4501 GGATGTGTCTCGCGATCGCATCGACTATCAGGC---GCTACCAGAACATGAAAAGCACAT 4557 Query 70485 TTTCCTGAGCAACCTGCGTTACCAGACGCTGTTGGATTCCGTTCAGGGTCGCAGTCCTAA 70544 ||| | ||||| ||| ||||| || ||| |||| ||| |||| || ||||| || || Sbjct 4558 CTTCATCAGCAATCTGAAATACCAAACACTGCTGGACTCCATTCAAGGACGCAGCCCGAA 4617 Query 70545 CGCAACACTGCTGCCGCTGATCTCCATTCCTGAGCTGGAGACATGGGTCGAGACCTGGTC 70604 || || || | |||||||||||||| || ||| |||| || ||| | || |||||| | Sbjct 4618 CGTCGCATTGTTACCGCTGATCTCCATCCCAGAGTTGGAAACCTGGATAGAAACCTGGGC 4677 Query 70605 GTTCTCCGAGACGATTCACAGCCGCAGCTATACGCACATTATCCGCGGTATGGTGGATGA 70664 || || || || || || ||| |||||| || || |||||| ||| || | || Sbjct 4678 ATTTTCAGAAACCATCCATTCCCGTTCCTATACCCATATCATCCGCAATATTGTCAACGA 4737 Query 70665 CCCTAGCA-TCGTTTTCGACGGCATCGTCACGGACGAAGAGAT 70706 || ||| | || ||||| | ||||| || | |||||||| Sbjct 4738 TCC-GGCACTGGTGTTCGATGATATCGTTACCAATGAAGAGAT 4779 >seq3821 Length=1769 Score = 149 bits (164), Expect = 4e-31 Identities = 180/245 (73%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 80912 ATGACCAGTCAGGAGATCGCCGAAATGGTCGGCAGTCGCCATGACAGCGTAAAACGCACC 80971 ||| |||| | || || || || |||| || |||||||||||||| |||||||| Sbjct 1168 ATGTCCAGCCTTGAAATTGCGGAGCTGGTTAAAAGCCGCCATGACAGCGTCAAACGCACG 1227 Query 80972 ATTGAAAGACTCGCTAAATCCGGCGTTATTACTTTTCCACCAATGGTGGAAAAGCCCACA 81031 || |||||| || ||||| || |||| |||||||||||||||||||||||| Sbjct 1228 ATCATCCGACTCGTGGAAAGTGGCGTAATCACTTCTCCACCAATGGTGGAAAAGCCCACC 1287 Query 81032 GCCGGGCGTCCGGCTACGTTTTACTTGTTCGAAGCCGAACAGGGTAAACGCGACAGCATC 81091 || || ||||| | || |||| | || || | |||||||||||| ||||| ||||| Sbjct 1288 GCAGGCCGTCCAACGACAGTTTATATATTTGAGGGCGAACAGGGTAAGCGCGATAGCATT 1347 Query 81092 GTTGTCGTGGCACAGCTTTCTCCTGAATTTACCGCACGCCTTGTTGATCGGTGGAGAGAG 81151 | ||||| || || || | ||||| || ||||| || || ||||| || ||| |||| Sbjct 1348 ATCGTCGTCGCTCAACTCTGCCCTGAGTTCACCGCCCGTCTGGTTGACCGCTGGCAAGAG 1407 Query 81152 CTTGA 81156 || || Sbjct 1408 CTGGA 1412 >seq3556 Length=1052 Score = 127 bits (140), Expect = 1e-24 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 80924 GAGATCGCCGAAATGGTCGGCAGTCGCCATGACAGCGTAAAACGCACCATTGAAAGACTC 80983 || ||||| || |||| || |||||||||| ||||| | | || ||| | || Sbjct 353 GAAATCGCGGAGCTGGTTAAGAGCCGCCATGACAAAGTAAAGCAATCGATAGAACGCCTT 294 Query 80984 GCTAAATCCGGCGTTATTACTTTTCCACCAATGGTGGAAAAGCCCACAGCCGGGCGTCCG 81043 ||| || ||| ||||| ||||| || ||||||| |||||||||||| || || || || Sbjct 293 GCTGAACGCGGTGTTATCACTTTACCCCCAATGGGGGAAAAGCCCACGGCAGGCCGCCCA 234 Query 81044 GCTACGTTTTACTTGTTCGAAGCCGAACAGGGTAAACGCGACAGCATCGTTGTCGTGGCA 81103 | || |||| |||| || | |||||||| || ||||| ||||| | ||||| || Sbjct 233 ACGACAGTTTATATGTTTGAGGGAGAACAGGGGAAGCGCGATAGCATTATCGTCGTCGCT 174 Query 81104 CAGCTTTCTCCTGAATTTACCGCACGCCTTGTTGATCGGTGGAGAGAGCTTGA 81156 || || | ||||| || ||||| || || ||||| || ||| |||||| || Sbjct 173 CAACTCTGCCCTGAGTTCACCGCCCGTCTGGTTGACCGCTGGCAAGAGCTGGA 121 >seq3070 Length=2402 Score = 100 bits (110), Expect = 2e-16 Identities = 232/349 (66%), Gaps = 3/349 (1%) Strand=Plus/Minus Query 23939 GCAATGCTGCTACTGCAACCAAATTACAAACGCCGCGGACAATCAACAGCGTAACGTTCG 23998 |||| || || | ||||| | ||| |||||| |||| | || ||| | || | || Sbjct 482 GCAACGCGGCGTCAGCAACAACATTTCAAACGGCGCGAAAGATTAACGGTGTGCCTTTTA 423 Query 23999 ATGGCTCTGCTGACATTGCTATCCCGACGCTGGTGTCTCGTGGACCTATTACTGCACTGG 24058 |||| || |||||||||| | || |||||||| || ||||| | || | | | | Sbjct 422 ATGGTTCAGCTGACATTGGTGTCAATACGCTGGTATCCCGTGGCCGGGTTCCGGTATTAA 363 Query 24059 AGGGTCATGCCCAGGGCGCACTGCCGGGTATTCAGATGTACGAAGCCTACAACAATGGCT 24118 || | ||||| | | | ||||| ||| | || || || ||| |||||| | Sbjct 362 GTGGCAAAAATCAGGGTAC---GTCCGGTATCCAGCTTTATGAGGCTTACGGCAATGGTT 306 Query 24119 ACCCGACAACCTACGGCAACATCTTGCATATGAAAGGTGCAGGAGCGGTTGGTGAGGGCG 24178 | ||||| | ||||| || || | ||| | || || || || | || || || | Sbjct 305 ATCCGACCCCTTACGGTAATGTCATCCATCTCAAGGGGGCTAAAGGTGGCGGGGAAGGGG 246 Query 24179 AGCTACTTGTCGGCTGGAGTGGAACAGATGGTGCTCATGCGCCGGTTTATGTTCGTTCAC 24238 | | | || |||||||| || || |||||||||||||| ||||||||| |||| | Sbjct 245 AATTGTTGGTTGGCTGGAGCGGTACCGATGGTGCTCATGCCCCGGTTTATATTCGCAGTC 186 Query 24239 GCCGTGATACTTCGACAGCAAACTGGTCTGGTTGGGCGCAGGTCTACAC 24287 | || ||| | || || |||||||| ||||||||| | | ||| Sbjct 185 GTCGGGATGTTGGGAGTGCGCCCTGGTCTGCATGGGCGCAGATTTTCAC 137 >seq3482 Length=8622 Score = 95.1 bits (104), Expect = 8e-15 Identities = 202/300 (67%), Gaps = 9/300 (3%) Strand=Plus/Plus Query 23934 GACGGGCAATGCTGCTACTGCAACCAAATTACAAACGCCGCGGACAATCAACAGCGTAAC 23993 ||| || ||||| | ||| || |||| | | || ||||| | || ||| |||| | Sbjct 59 GACCGGTAATGCGGATACCGCGACCAGACTGGCTACACCGCGAAAGATTAACGGCGTGCC 118 Query 23994 GTTCGATGGCTCTGCTGACATTGCTATCCCGACGCTGGTGTCTCGTGGACCTATTACTGC 24053 || ||||| || |||||||||| | || |||||||| || ||||| | || | || Sbjct 119 CTTTGATGGTTCGGCTGACATTGGTGTCAATACGCTGGTATCCCGTGGCCGGGTTCCGGC 178 Query 24054 ACTGGAGGGTCATGCCCAGGGCGCACTGCCGGGTATTCAGATGTACGAAGCCTACAACAA 24113 | | || | ||||| || | | ||||| ||| | || || || ||| |||| Sbjct 179 ATTAAGTGGCAACAATCAGGGGGC---GTCCGGTATCCAGCTTTATGAGGCTTACGACAA 235 Query 24114 TGGCTACCCGACAACCTACGGCAACATCTTGCATATGAAAGGTGCAGGAGCGGTTGGTGA 24173 ||| || ||||| || ||||| || || | ||| | || || || | | || | Sbjct 236 TGGGTATCCGACCACTTACGGTAATGTCATCCATCTCAATGGGGCTGCCGGGGA-----A 290 Query 24174 GGGCGAGCTACTTGTCGGCTGGAGTGGAACAGATGGTGCTCATGCGCCGGTTTATGTTCG 24233 ||| || | || || |||||||| || ||||||||||||| ||||||||| |||| Sbjct 291 GGG-GAATTGCTGGTTGGCTGGAGCGGTGTCAATGGTGCTCATGCCCCGGTTTATATTCG 349 >seq3868 Length=9451 Score = 86.0 bits (94), Expect = 4e-12 Identities = 205/308 (67%), Gaps = 9/308 (3%) Strand=Plus/Minus Query 23980 ATCAACAGCGTAACGTTCGATGGCTCTGCTGACATTGCTATCCCGACGCTGGTGTCTCGT 24039 || ||| |||| | || ||||| || |||||||||| | || |||||||| || ||| Sbjct 7414 ATTAACGGCGTGCCCTTTGATGGTTCGGCTGACATTGGTGTCAATACGCTGGTATCCCGT 7355 Query 24040 GGACCTATTACTGCACTGGAGGGTCATGCCCAGGGCGCACTGCCGGGTATTCAGATGTAC 24099 || | || | ||| | || | ||||| || | | ||||| ||| | || Sbjct 7354 GGCCGGGTTCCGGCATTAAGTGGCAACAATCAGGGGGC---GTCCGGTATCCAGCTTTAT 7298 Query 24100 GAAGCCTACAACAATGGCTACCCGACAACCTACGGCAACATCTTGCATATGAAAGGTGCA 24159 || || ||| ||||||| || ||||| | ||||| || || | ||| | || || || Sbjct 7297 GAGGCTTACGACAATGGGTATCCGACCCCTTACGGTAATGTCATCCATCTCAATGGGGCT 7238 Query 24160 GGAGCGGTTGGTGAGGGCGAGCTACTTGTCGGCTGGAGTGGAACAGATGGTGCTCATGCG 24219 | | || |||| || | || || |||||||| || ||||||||||||| Sbjct 7237 GCCGGGGA-----AGGG-GAATTGCTGGTTGGCTGGAGCGGTGTCAATGGTGCTCATGCC 7184 Query 24220 CCGGTTTATGTTCGTTCACGCCGTGATACTTCGACAGCAAACTGGTCTGGTTGGGCGCAG 24279 ||||||||| |||| || || ||| | | || |||||||| ||||||||| Sbjct 7183 CCGGTTTATATTCGCAGTCGTCGGGATTTTGGGGATGCCCCCTGGTCTGCATGGGCGCAG 7124 Query 24280 GTCTACAC 24287 || | ||| Sbjct 7123 GTTTTCAC 7116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330416020308480