Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq109 143 4e-29 >seq109 Length=996351 Score = 143 bits (158), Expect = 4e-29 Identities = 386/583 (66%), Gaps = 8/583 (1%) Strand=Plus/Minus Query 197023 AGATCCTCGTCGCTAAAGCCCGTACCGATCTTACAAATGGATTCG--TACATCTGGTTGT 197080 || || || || || ||||| || || || || || | || || ||| || ||| | Sbjct 682539 AGGTCATCCTCACTGAAGCCAGTGCCAATTTTGCAGA--GACTCTGATACTCCTCGTTCT 682482 Query 197081 CGGGATTGTAACAGGCGAGTAAGAAAGCGCCGTAGGTTCCCGTTCTCTTTCCCACCCCGT 197140 |||| | ||||| || ||||| || | || |||||||| || ||||| ||| || Sbjct 682481 CGGGGTCATAACAAGCCAGTAAAAATCCCCCATAGGTTCCAGTCCTCTTCCCCTTGCCAA 682422 Query 197141 TGAAGCCTCCGATAACCACCAGATCCAGAGTGTCGCACACCCCTTCCATGTAATCTTTCT 197200 || | || || || || || | ||||||||||||| |||||||||| ||||| |||| Sbjct 682421 TGTACCCCCCAATGACGACGACGTCCAGAGTGTCGCCGACCCCTTCCAGATAATCCTTCT 682362 Query 197201 TCAGTTTGAGCCAGCTTCTAGATCTCTTGGCAATCTCGTAGGTTGCGTTTACGTCCAGGG 197260 ||| || ||||| | | |||||||||||| ||||| || || |||| | | ||||| | Sbjct 682361 TCAACTTCAGCCAATTGCGAGATCTCTTGGCGATCTCATAAGTCGCGTCTTCCTCCAGAG 682302 Query 197261 TCTTGATCATCAATCCCTCGCAATCTTCCTTCACGGCCTTGTTCATGAAAGTTTGAATGT 197320 |||| | ||| | |||||||||| |||| || | || | | ||| || | | Sbjct 682301 TCTTCACCATGAGCCCCTCGCAATTCCCCTTGACCGACTCCTCGAGGAAGTCCTGGACCT 682242 Query 197321 CTTCCGGTTTGTTAGACATCATATCTCG-CGCGAAGATAAATTGTCCCTCCACCTCCGTA 197379 | ||| | | | || | || | ||||| | | | ||||| | || ||| Sbjct 682241 CCTCCATCCTCGT-GGTGTCCAAGCTGGTGGCGAACCTCCACTCCCCCTCGAGCT-CGTT 682184 Query 197380 AAACAACTCC-TCATAAGTTCCCTCCTCTCTCTGAAGCTCTTGTTGACCTGAGACACTCC 197438 || ||| ||| || ||||||| || ||| || |||| ||| | | || Sbjct 682183 GAAGTGTTCCTTCAGCAGCTCCCTCCGCTTGACAAAGGGCTCAGTGACAAGAGCCTCCCC 682124 Query 197439 GTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTTCCTT 197498 |||| |||| | ||||| ||||| || |||||||| | || || || || Sbjct 682123 ATTCAAATACAGAAGATCAAACATGAAGACACAAACCTGGACCTTGATATCGGACTCGTT 682064 Query 197499 GACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCTCAAC 197558 | | || || | || || || ||| | |||||||| || |||||||||||||| Sbjct 682063 GGCGTCCTTCCTCTTCCTCGTGCTCAGTATCTGAAAGGGGAGTATCTGCTTCTTCTCCCT 682004 Query 197559 GTCCCAAGCAACTGCCTCAGCGTCCAAGATGAAAGACTTCACT 197601 |||||| || || ||||| ||||| ||| || ||| ||| Sbjct 682003 GTCCCAGGCGACAGCCTCGCAATCCAAAATGCAACTCTTGACT 681961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676696034211840