Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019457.1 Length=44492 Score E Sequences producing significant alignments: (Bits) Value seq2705 165 2e-36 >seq2705 Length=2265 Score = 165 bits (182), Expect = 2e-36 Identities = 251/358 (70%), Gaps = 12/358 (3%) Strand=Plus/Plus Query 10847 AAAGTGGCCGAAGTCAGGTTGTGTTATTGGACCCATCCGCACAGTCGCATGGCGAATCCT 10906 ||| ||| || | |||||||||| |||||| | | || | ||||| |||| Sbjct 89 AAAATGGACGCACGCAGGTTGTGTGTCTGGACCACAAAGGATTATCTCCTGGCGCGTCCT 148 Query 10907 CGATGCCCAATATTTCGGATTGGCCCAACGACGCAAGCGTGTGTTTGTTGTCGCAAGTGC 10966 ||||| |||| ||||||| |||||||||| ||| |||||||| |||||||||||| | Sbjct 149 TGATGCTCAATTTTTCGGAGTGGCCCAACGCCGCCGCCGTGTGTTCGTTGTCGCAAGTTC 208 Query 10967 TCGAAAAGGATTCGATCCCGCAGAAGTATTATTTGAGCGCGAAGGCGTGCGAAGGGATTC 11026 |||||||| ||||||||||||| ||| | ||||||| | | |||| || ||||| | Sbjct 209 TCGAAAAGACTTCGATCCCGCAGCGGTACTTTTTGAGCTCAACAGCGTTCGCCGGGATAC 268 Query 11027 TGCGCCGAGCCGAGAAGCGTTGCAAGAAGCTGCC---------GGAA---TCATTAGAGA 11074 | ||||| |||||||| || ||| |||| |||| |||| | | | Sbjct 269 TCCGCCGCGCCGAGAAACGCAGCAGGAAGTTGCCAGCTATGCTGGAAAACGCTCTGATGT 328 Query 11075 CGGCTCTCATTGGGACGATCCGAGAAACGCACACCCGACCTTAAATCAATCCTTCAATAC 11134 ||| ||| |||||| | || ||| ||||||| || | || || ||| ||||| Sbjct 329 CGGTAGTCACTGGGACAACCCAGCAAATCCACACCCAGCCCTGAACCAGTCCAACAATAT 388 Query 11135 GGGCGGAATCGGTGCAAGTAACCAAGAAATATTCAGTCAGCGCGGTGCGGGAGTTGTA 11192 || || || || || || || || ||||| ||||| |||||||| | || ||||| Sbjct 389 TGGTGGTATTGGCGCCAGCAATCAGGAAATTTTCAGCCAGCGCGGATCTGGGCTTGTA 446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142246097048064