Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq14 183 6e-41 seq320 105 1e-17 >seq14 Length=2234412 Score = 183 bits (202), Expect = 6e-41 Identities = 646/986 (66%), Gaps = 66/986 (7%) Strand=Plus/Minus Query 212901 AGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAA 212960 || || || ||||| | |||||| ||||| || ||||| | ||| ||| | ||| Sbjct 232654 AGATGGGGATTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTG 232595 Query 212961 GTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATG 213020 ||||||||||||||| ||||||||| ||||| ||||| || || ||||| ||||| Sbjct 232594 GTGTAGGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATT 232535 Query 213021 GGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGCC 213080 || |||| || ||| |||||| || ||||| | || | || | ||| Sbjct 232534 GGTGCCAGTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCCTTGAGTTTAGCC 232475 Query 213081 CAGTCCCATCTGCCAGACAGGTCCTCGTC--CTTCACGTTCCACATGTCAAACTGCAAGA 213138 ||||||| | |||| | ||| | || ||||||||| |||| | || Sbjct 232474 CAGTCCC---------AGAGGT--TTGTCGGTGTGACACCCCACATGTCGTACTGGAGGA 232426 Query 213139 TGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCT 213198 |||| | ||| || || ||| | ||| | ||| | || | ||| | ||| || | Sbjct 232425 TGCCCTGGCTGACTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTT 232366 Query 213199 CGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCT 213258 | ||||| |||| ||||||| | ||||||| ||| || || |||| ||||||| |||| Sbjct 232365 CACAGGATGCCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCT 232306 Query 213259 TGGCCTCTGGGGAC-GT-GAAGGGCATCA-TCATGCGTTGGAACACATCAGCCAGCCCCT 213315 |||||| || || ||| || || | ||| || |||| |||| ||||| |||| Sbjct 232305 GGGCCTC--ATCACTGTCGAATGG-ATAACGCATCAGTAGGAATGCATCTGCCAGACCCT 232249 Query 213316 GGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT--AGACTTGGAGCACTCCTCCAAGGG 213373 | || || || || ||||| | |||||||| ||| |||| | || |||||| | || Sbjct 232248 GAACTCCAATTCCCATGGGACGGTGTCTCATGTTGGAGAC-TCTTGC-CTCCTCAACTGG 232191 Query 213374 GTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGC 213433 || | ||| |||||||| | ||| ||| || | |||| | |||||| ||| || Sbjct 232190 ATAGTAATTGACGTCGATGACCCTGTCGAGATTTCTGGTGACAACTTTGACGAC-TG--- 232135 Query 213434 CAGGTACTCGTGATT---GAACACGTA-GCCCCCGTC-CTG----CACAAACTCAGGCAG 213484 || | | || ||| | || | | | || ||| ||||||| | Sbjct 232134 -----TCTTGAGTTTGTCGAAGTCATAGGTCTTCTTCACTGGATCCACAAACATGTTGAC 232080 Query 213485 GGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTC 213544 || || |||| ||||| || || || || | | | | |||||| | |||||| Sbjct 232079 TGCTATCGATGCCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCTC 232020 Query 213545 GGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGC 213604 |||||||| |||||||||| || || || ||||||| || || || || |||| Sbjct 232019 GGTGCACAAGTTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCA 231960 Query 213605 AGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTAT--CTGG 213662 | ||||||||| ||||||||||| | || ||||| | || |||| || || ||| Sbjct 231959 GGCATCCTTGTACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACATTAGAATTGCTG- 231901 Query 213663 CTCCAGAGGT-AC---CTGGC-CTTGACCACCCGCCTGACAGCTCCGGGCGT-AGCCTCG 213716 |||| || | || ||||| ||||| ||| || | || || | ||||| Sbjct 231900 -TCCACAGCTCACGGGCTGGCACTTGA-----CGCTTGTAA----CGAGCCTCCTCCTCG 231851 Query 213717 TACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTC---CAGTCCCGGACAG 213773 |||| | ||| |||| | |||||| | ||||| |||| || || ||||| Sbjct 231850 TACTTTGTGTACAGCTTATCGAATTCCTCACCCCA---AGTGTCACAGAGGCCTGGACAC 231794 Query 213774 GATGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACTCTCTGCATGAACAGGTCC 213833 ||| ||||| | |||||| ||||| | |||| | | |||||||| || Sbjct 231793 TCGTGGGGGCACATCAAACTCCAGGGACCGTCTGCCTTGACACGTTTCATGAACAAATCG 231734 Query 213834 GGGACCCACAGCGCGGTGAACAGGTC 213859 || | |||||| ||| |||||| || Sbjct 231733 GGTATCCACAGGGCGTAGAACAGCTC 231708 Score = 178 bits (196), Expect = 2e-39 Identities = 509/768 (66%), Gaps = 41/768 (5%) Strand=Plus/Minus Query 212900 CAGGTGAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGA 212959 ||| || || ||||| | ||| || ||||| || ||||| | ||| ||| | ||| Sbjct 776208 CAGATGGGGATTGACGACCTGAAATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCT 776149 Query 212960 AGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCAT 213019 ||||||||||||||| ||||||||| ||||| ||||| || || ||||| ||||| Sbjct 776148 GGTGTAGGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCAT 776089 Query 213020 GGGAGCCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCCGAAGCTCTGC 213079 || |||| || ||| |||||| || ||||| | || | || | || Sbjct 776088 TGGTGCCAGTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCCTTGAGTTTAGC 776029 Query 213080 CCAGTCCCATCTGCCAGACAGGTCCTCGTC--CTTCACGTTCCACATGTCAAACTGCAAG 213137 |||||||| | |||| | ||| | || ||||||||| |||| | | Sbjct 776028 CCAGTCCC---------AGAGGT--TTGTCGGTGTGACACCCCACATGTCGTACTGGAGG 775980 Query 213138 ATGCCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGC 213197 ||||| | ||| || || ||| | ||| | ||| | || | ||| | ||| || Sbjct 775979 ATGCCCTGGCTGACTGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGT 775920 Query 213198 TCGCAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTC 213257 || ||||| |||| ||||||| | ||||||| ||| || || |||| ||||||| ||| Sbjct 775919 TCACAGGATGCCTCCAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTC 775860 Query 213258 TTGGCCTCTGGGGAC-GT-GAAGGGCATCA-TCATGCGTTGGAACACATCAGCCAGCCCC 213314 | |||||| || || ||| || || | ||| || |||| |||| ||||| ||| Sbjct 775859 TGGGCCTC--ATCACTGTCGAATGG-ATAACGCATCAGTAGGAATGCATCTGCCAGACCC 775803 Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT--AGACTTGGAGCACTCCTCCAAGG 213372 || || || || || ||||| | |||||||| ||| |||| | || |||||| | | Sbjct 775802 TGAACTCCAATTCCCATGGGACGGTGTCTCATGTTGGAGAC-TCTTGC-CTCCTCAACTG 775745 Query 213373 GGTAAAAGTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGG 213432 | || | ||| |||||||| | ||| ||| || | |||| | |||||| ||| || Sbjct 775744 GATAGTAATTGACGTCGATGACCCTGTCGAGATTTCTGGTGACAACTTTGACGAC-TG-- 775688 Query 213433 CCAGGTACTCGTGATT---GAACACGTA-GCCCCCGTC-CTG----CACAAACTCAGGCA 213483 || | | || ||| | || | | | || ||| ||||||| | Sbjct 775687 ------TCTTGAGTTTGTCGAAGTCATAGGTCTTCTTCACTGGATCCACAAACATGTTGA 775634 Query 213484 GGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCT 213543 || || |||| ||||| || || || || | | | | |||||| | ||||| Sbjct 775633 CTGCTATCGATGCCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACTCAACGATCT 775574 Query 213544 CGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGG 213603 ||||||||| |||||||||| || || || ||||||| || || || || |||| Sbjct 775573 CGGTGCACAAGTTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGC 775514 Query 213604 CAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACA 213651 | ||||||||| ||||||||||| | || ||||| | || |||| Sbjct 775513 AGGCATCCTTGTACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACA 775466 >seq320 Length=265502 Score = 105 bits (116), Expect = 1e-17 Identities = 123/166 (74%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 ||||||||||| || | |||||| ||||| | ||||| || |||||| | |||||| Sbjct 14905 TACATCTCAGAATGTATATTCTCCATAGCAACTTGGAATCCATAGAAGCATCGTGCCTCA 14846 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || ||||| || |||||| |||| ||||||||||| || || |||||||| Sbjct 14845 GTGACTTGCACCTCCTGACTGAATCTTTCCACAAGATTCTCATTCACAATTCCATCTGAG 14786 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGT 48590 |||||||| || || || || || || ||||||||| || |||| Sbjct 14785 GCAGCAAAAAAAGCTAGTACGTGGGAAATGAAATGGCGTTCATTGT 14740 Score = 91.5 bits (100), Expect = 3e-13 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 48153 CTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTT 48212 ||||||||| | ||| ||| | || ||| |||||||||||||| || | || || Sbjct 15473 CTTCGTCCCTGGAGATAAGCTCATTACTGAAAGTGAGACCAGGCATGAGTCCACGCTTTT 15414 Query 48213 TGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACG 48272 | | |||||| || || |||||| ||||||||||| || ||||| || || ||||| | Sbjct 15413 TCAACCAGAAGATGGCAGCGAAACTACCAGAGAAGAAAATTCCCTCGACAGCGGCGAAGG 15354 Query 48273 CGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCTG 48332 || | || || || |||| | || | | || | |||||| || ||||||| | Sbjct 15353 CGATTAGTCTTTCGGCGAACGTTGCAGTTTCGTTTACAATCCAGTTGAGTGCCCAGTTAG 15294 Query 48333 CCTTCTTC 48340 | |||||| Sbjct 15293 CTTTCTTC 15286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931486595973120