Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019503.1 Length=166499 Score E Sequences producing significant alignments: (Bits) Value seq3532 197 1e-45 seq3176 152 5e-32 seq2656 82.4 8e-11 >seq3532 Length=11862 Score = 197 bits (218), Expect = 1e-45 Identities = 154/184 (84%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 60070 ATTACAAGCTCTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 60129 |||||| ||| ||||| || ||||| | || ||||| || |||||||| || |||| | Sbjct 11149 ATTACAGGCTTTCAGTGAAAGTACGCGTAATCACGTCACGTTGCTGTTCTGGGGTCAATG 11208 Query 60130 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 60189 |||| || || ||||||||||| || ||||||||||||| |||||| ||||||||||| | Sbjct 11209 AGTTGAAACGCACTGCATAACCAGAAACACGGATGGTCAACTGCGGGTATTTTTCCGGGT 11268 Query 60190 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 60249 | || || ||||||||||| |||||||| ||||||||||| |||||||||||||| || | Sbjct 11269 GTTTTACCGCATCTTCCAGCGTTTCACGGCGCAGAACGTTCACGTTCAGGTGTTGCCCCC 11328 Query 60250 CTTC 60253 |||| Sbjct 11329 CTTC 11332 >seq3176 Length=18404 Score = 152 bits (168), Expect = 5e-32 Identities = 140/177 (79%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 60080 CTCAGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCG 60139 || ||| || ||||| | |||||||| |||||||||| ||||| ||||| ||||| Sbjct 6324 CTGAGTGAAAGTACGGGTAATAACGTCTTGCTGCTGTTCTTTGGTCAGCGAGTTGAAGCG 6383 Query 60140 AACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGC 60199 || |||||||| || ||||||||||||| |||||||||||||||||| || | | || Sbjct 6384 CACGGCATAACCAGAAACACGGATGGTCAACTGCGGATATTTTTCCGGGTGTTCCATGGC 6443 Query 60200 ATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 60256 ||| ||| ||||||| || ||||| ||||||||||||||||||||||| || Sbjct 6444 ATCCAACAGCATTTCACGGTTCATCACGTTCACGTTCAGGTGTTGACCACCTTCGAT 6500 >seq2656 Length=1220 Score = 82.4 bits (90), Expect = 8e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 69379 TGGTGCTGATTGACGGAATCGAACCGCCGACCTTCTCATTACAAGTGAGTTGCTCTACCT 69438 |||||| | || ||||||||||| | |||||| || ||||||||| |||||||||||| Sbjct 182 TGGTGCCGGCTGCCGGAATCGAACTGGCGACCTACTGATTACAAGTCAGTTGCTCTACCA 241 Query 69439 ACTGAGCTAA 69448 |||||||||| Sbjct 242 ACTGAGCTAA 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532642379627520