Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq3764 98.7 1e-15 seq3771 93.3 6e-14 >seq3764 Length=2321 Score = 98.7 bits (108), Expect = 1e-15 Identities = 73/84 (87%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 198934 TGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCGA 198993 ||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||| | Sbjct 2199 TGGCCCCTTAGCTCAGT-GGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTCAA 2141 Query 198994 GTCCAGTAGGGGCCACCAGATAAA 199017 ||| ||||||||||| ||||| Sbjct 2140 ACCCAACAGGGGCCACCATATAAA 2117 >seq3771 Length=66348 Score = 93.3 bits (102), Expect = 6e-14 Identities = 71/83 (86%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 199779 TTTCGGTGATTAGCGCAG-TTGGTAGCGCGTCTGGTTTGGGACCAGAGGGTCACAGGTTC 199837 |||||| || |||||||| |||||||||| ||||||||||||||| ||||| |||||| Sbjct 37897 TTTCGGCGAGTAGCGCAGCTTGGTAGCGCAACTGGTTTGGGACCAGTGGGTCGGAGGTTC 37956 Query 199838 GAGTCCTGTATCACCGACCACTT 199860 || |||| | || |||||||||| Sbjct 37957 GAATCCTCTCTCGCCGACCACTT 37979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741412824099840