Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq3839 201 4e-47 >seq3839 Length=10135 Score = 201 bits (222), Expect = 4e-47 Identities = 520/787 (66%), Gaps = 4/787 (1%) Strand=Plus/Minus Query 45437 ATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGAT 45496 |||||||| ||||| || ||| |||| | | | || | || | ||| | ||| Sbjct 1882 ATGAAACAGTATCTGGAATTGATGCAGAAGGTGCTTGATGAGGGAACGCCGAAGGGAGAC 1823 Query 45497 CGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGAC 45556 | || || || || || || ||| | ||||||| ||| |||| || || |||| ||| Sbjct 1822 AGAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGAC 1763 Query 45557 GGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTC 45616 || || ||||| ||||| || || | ||| | ||||| |||||| | || ||| | Sbjct 1762 GGTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGTTG 1703 Query 45617 TGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGG 45676 ||||| | || || || || || ||| ||||| |||| || ||| || | |||||| Sbjct 1702 TGGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTGG 1643 Query 45677 GACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCG 45736 || || ||||||||||| || |||||||| || || | ||||| ||| ||||| | Sbjct 1642 GATGAATGGGCCGATGAGAATGGCGATCTTGGGCCGGTATACGGTAAGCAGTGGCGCGCT 1583 Query 45737 TGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAG 45796 ||| | ||| || || | | |||||| | | || | | | | ||| Sbjct 1582 TGGGGCGCGGCGGATGGTCGCCAGATTGACCAACTGCAAACCGTGCTGCAACAGTTAAAG 1523 Query 45797 CGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAA 45856 | | || || || || || | |||| || |||||||||| |||| | || Sbjct 1522 CAGGATCCAAATTCACGCCGTATCATTGTTTCTGCCTGGAACGTGGGTGAGTTAGATCAA 1463 Query 45857 ATGAAGTTGCCCCCATGTCATTACGCCTTT-CAGTTTTACGTCGCGAATGGCCGGTTGTC 45915 ||| | || | || || || | || ||| || || ||||| ||| ||||| | || Sbjct 1462 ATGGCGCTGGCACCGTGCCA-TGCGTTTTTCCAATTCTACGTGGCGGATGGCAAACTTTC 1404 Query 45916 ATGCATGTGGCAACAGCGTTC-TGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTA 45974 || | | ||||| || ||| ||| || || || ||||||| || || || | Sbjct 1403 CTGTCAGCTTTACCAGCGCTCGTGT-GATGTGTTCCTCGGTCTGCCGTTCAATATTGCCA 1345 Query 45975 GCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCA 46034 | ||||| ||| || |||||| | || || || |||||||| || |||||||| | Sbjct 1344 GTTATGCACTGCTGGTGCATATGATGGCGCAGCAGTGCGACCTTGAAGTCGGCGACTTTG 1285 Query 46035 TTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGC 46094 | | ||||| || ||| |||| ||||||| || ||| |||| || || | |||| | Sbjct 1284 TCTGGACCGGTGGTGACACCCATCTGTACAACAACCATATGGAGCAGACGCATTTGCAAC 1225 Query 46095 TGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTCTATCT 46154 ||| || ||||| |||||||||| | | || ||||| || | || | | Sbjct 1224 TGAGCCGTGAGCCAAAAGCGCTGCCGAAATTGATCATTAAACGCCGTCCTGCCTCGCTGT 1165 Query 46155 TTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCCGGCGATTAAGG 46214 |||||||| | | ||| ||||| ||| | | ||||| || ||||| || || || |||| Sbjct 1164 TTGACTATCAGTTCGATGATTTCGAAATAGAAGGCTACGATCCGCATCCTGCCATCAAGG 1105 Query 46215 CTCCTGT 46221 | || || Sbjct 1104 CACCGGT 1098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157742966801152