Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019545.1 Length=47355 Score E Sequences producing significant alignments: (Bits) Value seq2778 95.1 4e-15 >seq2778 Length=2936 Score = 95.1 bits (104), Expect = 4e-15 Identities = 271/412 (66%), Gaps = 11/412 (3%) Strand=Plus/Minus Query 44875 GCATACCGAGATGGCTCCGGCATATGGACCATCTGTCGCGGTGCCACAAAGGTGGACGGT 44934 || |||| |||||| ||| || ||||| || || | || | ||| ||| || || Sbjct 2140 GCCTACCCTGATGGCGGCGGTATCTGGACGATTTGCGGTGGCGTGACACGGGTAGATGGC 2081 Query 44935 AAACCCGTTGTTCGGGGCATGACGCTGTCAAAGGCGAAATGCGACCAGGTTAACGCTATT 44994 || || || || |||||| | |||| | | | | |||| || || | || Sbjct 2080 AAGCCGGTAGTGAAGGGCATAAAGCTGACCGCCGAGCAGTGCGCAAAGATTGATGCCGCA 2021 Query 44995 GAACGTGACAGGGCGCTGGCGTGGGTGGAGCGCAATATTAAAGTGCCGCTGACGGAACCA 45054 |||| | | |||||| | |||||||| || || ||||||||||||| || || | Sbjct 2020 GAACAGCAAAAGGCGCTCGATTGGGTGGACCGTAACGTTAAAGTGCCGCTCACTGAGACT 1961 Query 45055 CAGAAAGCAGGTATTGCTTCTTTCTGCCCTTACAACATCGGCCCAGGAAAATGTTTCCCG 45114 ||||||| || ||||| || || || || | || ||||| || || || || ||| | Sbjct 1960 CAGAAAGTCGGCATTGCCTCATTTTGTCCGTGGAATATCGGTCCCGGTAACTGCTTCACC 1901 Query 45115 TCTACGTTCTATAAGCGAATT-AATGCTGGCGACCGTAAAGGAGCCTGTGAAGCTATTCG 45173 || |||||||| || |||| ||||| ||||| | | || |||||| ||| ||| Sbjct 1900 TCAACGTTCTA-CCGCAAATTGAATGCAGGCGATCTGATTGGTGCCTGTAAAGAGATTAA 1842 Query 45174 CTGGTGGATTAAAGACGGTGGCCGCGATTGTCGTCTGACCAAAGGCCAGAAAAATGGGTG 45233 | ||||| ||||| || ||||| ||| | || | || | || || Sbjct 1841 GCGCTGGATCTGGGACGGCGGGAAAGATTGCCGTAT--CC---GCGCAAACAA----CTG 1791 Query 45234 CTATGGTCAGGTAGAGCGACGAGACCAGGAAAGCGCGTTGGCGTGCTGGGGG 45285 || || ||| ||||||| || |||||||| || | | | ||||||||| Sbjct 1790 TTACGGGCAGATAGAGCGGCGTGACCAGGAGTCCGAGCTTTCTTGCTGGGGG 1739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151407265353472