Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq2351 116 4e-21 seq3764 86.0 6e-12 >seq2351 Length=10305 Score = 116 bits (128), Expect = 4e-21 Identities = 279/422 (66%), Gaps = 0/422 (0%) Strand=Plus/Plus Query 73416 CCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGTCCTG 73475 || || ||||| ||| | || || ||||| || |||||||||||||| ||||| || || Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 73476 ATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGACTAT 73535 || | || |||| |||||| || || ||||| || ||| | ||||| | || Sbjct 2649 ATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATAC 2708 Query 73536 GTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGCTATCCGTGGGATTGGCAGTCCT 73595 || || | || || ||||||||| | ||| ||| ||| |||| | | || || || Sbjct 2709 GTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCG 2768 Query 73596 ATTCGCGGCGGAGAGATGGTTCACACAGGCCTGATCCCATTCATCAAGTATCTCACTGGG 73655 |||||||| || || | || || ||| || || ||| || || || Sbjct 2769 ATTCGCGGTGGTGAAGCATTCCATACTGGCTGTATTCCTTTCTATAAACATTTCCAGACC 2828 Query 73656 GCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAACAGCGTACATCCCT 73715 || | || || ||||| |||||||| | || || || |||||||| || ||| Sbjct 2829 GCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTACCCG 2888 Query 73716 CTGTGGCATTACCAGTTCGATGACGTCGTTGTACTGAAGAATAACCGTGGTACTGAAGAG 73775 ||||||||| | | || | | | || |||||||| |||||||| |||| Sbjct 2889 CTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGAAGGC 2948 Query 73776 AACCGCGAACGCCGTATCGACTATGGTATTCAGATCAACCGCGTGATGTTTGAGCGCCTG 73835 ||||||| || | |||| || || | ||| | ||| |||||| | |||||||| Sbjct 2949 AACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCGCCTG 3008 Query 73836 GT 73837 || Sbjct 3009 GT 3010 >seq3764 Length=2321 Score = 86.0 bits (94), Expect = 6e-12 Identities = 63/71 (89%), Gaps = 2/71 (3%) Strand=Plus/Plus Query 147627 CCTGATTGGGTTTGAACCAATGACCAATCGATTATGAGTCGACTGCTCTAACCGACTGAG 147686 |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||| |||||| Sbjct 2131 CCTG-TTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTCTAACC-ACTGAG 2188 Query 147687 CTACAGGACCA 147697 ||| || ||| Sbjct 2189 CTAAGGGGCCA 2199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510643470827520