Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_019919.2 Length=122696 Score E Sequences producing significant alignments: (Bits) Value seq2333 87.8 1e-12 >seq2333 Length=8475 Score = 87.8 bits (96), Expect = 1e-12 Identities = 183/270 (68%), Gaps = 12/270 (4%) Strand=Plus/Minus Query 56559 ACCGAGAAAGAGGTTTACGATGCTTGTCAGGGTCTAGAGTATGAAATTAATACGATGTTC 56618 ||||| |||||| ||||| || | ||| || || |||||| | |||||| || | Sbjct 5182 ACCGAAAAAGAGTGCTACGACGCCTTCCAGTCGCTGGAATATGAAGTAAATACGCTGCAC 5123 Query 56619 AACTCCAATGGCCAGAGTCCATTTATCACATTTGGTTTTGGTCTAGGGACTTCTTGGGAA 56678 | | ||||||| |||| || ||| |||| |||||||| ||||| || || ||||||| Sbjct 5122 ACCGCCAATGGTCAGACACCGTTTGTCACCTTTGGTTTCGGTCTCGGCACCCGTTGGGAA 5063 Query 56679 GCACGTCTTGTACAGAAAGCAATCCTAGAAGTACGCATGGATGGTCTTGGTATCAA---T 56735 | || || | ||| || | ||||| ||||| | ||||| || | || | Sbjct 5062 TCGCGCCTGATTCAGCAATCCATCCTGCGCAACCGCATTGCCGGTCTGGGCAAAAACCGT 5003 Query 56736 AAACGCACTGCTATATTCCCTAAACTGGTGTTTGTACTTCGTGATGGTGT---TAACATG 56792 ||| || || | ||||| ||||||||||| | | || || ||||| | ||| | Sbjct 5002 AAA---ACCGCGGTGTTCCCCAAACTGGTGTTCGCTATCCGCGACGGTGTCAATCACAAG 4946 Query 56793 GTTCCTGGTGATGTTAACTATGATATCAAG 56822 | ||| ||| |||||||| |||||| Sbjct 4945 G---CTGCCGATCCGAACTATGACATCAAG 4919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 392483418583936