Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq3741 95.1 1e-14 >seq3741 Length=9757 Score = 95.1 bits (104), Expect = 1e-14 Identities = 471/733 (64%), Gaps = 19/733 (3%) Strand=Plus/Minus Query 38615 GAAATCCACCCTTTTTTGAAAGCAATTTCTTCCAAGCACGCAATCTTCAATCCTTGACAG 38674 || ||||| ||||| ||| ||||||||||||| ||| || ||||||| || |||| Sbjct 3705 GAGATCCAACCTTTGCGGAAGGCAATTTCTTCCAGGCAAGCTATCTTCATCCCCTGACGT 3646 Query 38675 TTCTCAATAGTCTGCACGAATTGACCAGCTTCCATCAGACTGGCGTGTGTTCCTGTGTCA 38734 || ||||| || || | || || ||||| ||||| || | || || || || || Sbjct 3645 TTTTCAATGGTATGAATAAACTGCGAGGCTTCAATCAGGCTATCATGGGTGCCGGTATCC 3586 Query 38735 AGCCAAGTAAATCCTCGTCCGAGAACTTCCACTTGTAACTTCCTGTCTTCTAGGTAGCTG 38794 ||||| | ||| ||||| || || | |||||| | | | | | | || | || | Sbjct 3585 AGCCAGGCAAAACCTCGGCCCAGCAGTTCCACGTTAAGCGTGCCTTGCTCCAAATACATC 3526 Query 38795 CGATTGATATCAGTGATCTCCAGTTCTCCACGCGCGGAAGGGGTTA-CTTCTAATGCACG 38853 | || | |||||| || | ||| || || |||||||| | | || || | || Sbjct 3525 TGGTTCAGCGTAGTGATTTCTAATTCACCGCGTGCGGAAGGTTTAACCTGCTTAGCCATT 3466 Query 38854 TTGAATAACAGAGTTATCATAGAAATACAAACCTGTGACAGCATAATCTGATTTAGGATT 38913 | || | || || ||||| ||||| | ||||| || || | ||||| || || Sbjct 3465 TCGACT-ACGTTATTGTCATAAAAATAGAGCCCTGTCACCGCCCAGCTAGATTTGGGCTT 3407 Query 38914 TTCAGGTTTCTCTTCAATAGAAATAGCTTGACGATTACTCC--CAAATTCAACCACACCG 38971 |||||||||||||| || | |||| || || | ||||||| || || || Sbjct 3406 AAGCGGTTTCTCTTCAATCGAGAGGGCTT--TGAAATCTGCATCAAATTCCACTACGCCA 3349 Query 38972 AATCGTTCAGGATCTTTCACCAAATACCCGAAAATACAAGCTCCGCCCCAAACATCTACC 39031 || || || || || ||||| ||| || ||| || | | |||| ||| | Sbjct 3348 AAGCGCTCTGGGTCGGTCACCTGATAACC--AAACAC-CGTTGCGCC---TTGTTCTTGC 3295 Query 39032 ATCTCACTGGCGTTAATCAGTAGTTTACCAAAGCTTTGTCCGAAGAATAGGTTGTCACCT 39091 || || || || ||| |||||| ||||| || || || | | |||||||| Sbjct 3294 -GCT-ACCGGACTT-TCCAGCTTTTTACCGAAGCTCTGGCCAAAATAGATATTGTCACCC 3238 Query 39092 AAAATAAGAGCAACAGAG-TCTTCTCCGATAAAATCTTTACCTATGATGAAAGCTTCCGC 39150 ||||| | || ||| | || | |||||| |||| ||| ||||| || || | || Sbjct 3237 AAAATCAATGC-GCAGCGCTCACCGTTGATAAATTCTTCACCAATGATAAACGCCTGTGC 3179 Query 39151 AAGACC-TCGTGGCTCGGATTGGATTGCGTAAGTGAGTTTTATCCCAAACATAGACCCAT 39209 || || || |||| || || || || |||| || || ||||| |||| Sbjct 3178 CAGGCCGTCAGGGCTTGG-CTGCTCCGCATAGCTGAGGTTGATACCAAAGTGGCTGCCAT 3120 Query 39210 CTCCGAGAAGATACTCAAAGTCTTCCTGATCACCTGGTGTGGTGATGATTAAAATATCCT 39269 | || | || | || | || | || || |||| || || ||||||| Sbjct 3119 CACCTAACAGGCGTTGGAATGAGGGAAGGTCTTCGGGGGTACTGATAATCAAGATATCCT 3060 Query 39270 TAATGTCAGCCAACATCAATACCGATAAAGGGTAGTAGATCATGGGTTTGTCATACACAG 39329 |||| | |||||||||| || || | ||||| || | ||||||||||||||| | | Sbjct 3059 GAATGCCTGCCAACATCAGCACGGAGAGTGGGTAATACACCATGGGTTTGTCATAGATGG 3000 Query 39330 GGAGCAATTGCTT 39342 | || | |||||| Sbjct 2999 GCAGTAGTTGCTT 2987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472606957532160