Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_020083.1 Length=157834 Score E Sequences producing significant alignments: (Bits) Value seq3764 114 1e-20 seq2351 111 2e-19 >seq3764 Length=2321 Score = 114 bits (126), Expect = 1e-20 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 19326 ATTTGGTAGTCCCTGTTGGCTTTGAACCAACGACCAAGCGATTATGAGTCGCATGCTCTA 19385 || |||| | ||||||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 2120 ATATGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTCTA 2179 Query 19386 ACCACTGAGCTAAGGG 19401 |||||||||||||||| Sbjct 2180 ACCACTGAGCTAAGGG 2195 >seq2351 Length=10305 Score = 111 bits (122), Expect = 2e-19 Identities = 270/406 (67%), Gaps = 10/406 (2%) Strand=Plus/Plus Query 106058 TGCCGACCCCGATCATGGCTGGCGTCCGTACCCGTACCCGTCAGTTCAGCTCCTGTGTGC 106117 |||| || ||||||||| | ||||| ||||||| |||||||||||||||||||| ||| Sbjct 2587 TGCCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGT 2646 Query 106118 TGATCAAAGTCGGCGACACGCTGGACTCTATCAAGGCCGCAGGCTCTGCTATCGTTGACT 106177 |||| | |||||||| ||||| || || || ||| | | ||||||||| | | Sbjct 2647 TGATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAAT 2706 Query 106178 ATGTCAGCAAGCGCGCAGGCATCGGTCTGGACGTGGGGGAGATTCGTGCCCTCGGTGCTC 106237 | || |||| || || ||||| | ||| || |||||||| || ||| | Sbjct 2707 ACGTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCC 2766 Query 106238 CTATCCGTGGCGGTGAGATGGAGCATACCGGAACTATCCCATTCATCAAGAAGTTCGTCG 106297 | || || || ||||| ||||| || ||| || ||| || | ||| Sbjct 2767 CGATTCGCGGTGGTGAAGCATTCCATACTGGCTGTATTCCTTTCTATAAACATTTC---- 2822 Query 106298 GTGACC----TGAAGAGCTGCTCTCAGGGTGGGGTTCGCGGCGGCTCTATGACTGCCTAC 106353 |||| |||| |||||| ||||| || || |||||||| | || | Sbjct 2823 CAGACCGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTT 2882 Query 106354 TATCCGATGTGGCACCT-GCAGTTCCCAGCCATGATTGTTCTGAAGAATAACCGTGGCAC 106412 || ||| ||||||| || | ||| |||| || | || |||||||| ||||||||| Sbjct 2883 TACCCGCTGTGGCATCTGGAAGTGGAAAGCC-TGCTGGTGCTGAAGAACAACCGTGGCGT 2941 Query 106413 TGAGAACAACCGCGAACGCCGCACTGATTATGGTGTGCAGATCAAC 106458 || |||||||| || | | ||||| || |||||| | ||| Sbjct 2942 GGAAGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAAC 2987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504915754936320