Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq22 190 1e-42 seq162 136 3e-26 seq10 118 7e-21 seq79 105 4e-17 seq1175 102 5e-16 >seq22 Length=2558081 Score = 190 bits (210), Expect = 1e-42 Identities = 379/553 (69%), Gaps = 10/553 (2%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 ||||| ||||||||||| ||||| || ||| ||||| | ||| |||||| | || ||| Sbjct 1851579 GCAATCGGTATTGATTTGGGAACCACATACTCCTGTGTGGGTGTGTGGCAACAAGGAAAA 1851638 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 || ||||| || ||||| ||||| || || ||||||||||||||||| ||| | || || Sbjct 1851639 GTGGAAATCATCGCCAACGACCAGGGCAACAGAACAACACCATCATACGTTGCCTTCACC 1851698 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAAT 474508 || || || | || || ||||| || || |||||| || ||||| | ||| Sbjct 1851699 GACACCGAGAGGTTAATCGGCGATGCAGCCAAGAATCAAGTGGCGATGAATCCAGCTAAC 1851758 Query 474509 ACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCT 474568 ||| |||| || || ||||| || ||||| || || || || || ||| |||| | Sbjct 1851759 ACTGTTTTCGACGCCAAAAGGTTAATTGGCCGCAAATTCGACGACCCCAAAATCCAGGCG 1851818 Query 474569 GATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATAT--AGAAG 474626 || || || ||||| || || ||| | | | || || || ||| | || || | Sbjct 1851819 GACATCAAACACTGGCCGTTCAAAGTGGTCAGCGAGGGAGGAAAGCCAAAGATTGAGGTG 1851878 Query 474627 CAATACACGCAGGTGAAACTAAACAATTTTCA--CCGGAACAAATTTCTTCAATGGTTTT 474684 | | | ||| || || | || | |||| || || | || ||| ||||| || Sbjct 1851879 GAGTTC-CGC-GGCGAGAGGAA--GAGGTTCAACCCCGAGGAGATCAGTTCCATGGTCTT 1851934 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAA 474743 | || ||||| | || || ||| ||| ||| || || | ||| ||| || || | Sbjct 1851935 GACGAAGATGAAGGAGACAGCTGAG-GCATTTCTCGGGGAAAAGGTACGTGAAGCTGTCA 1851993 Query 474744 TTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAA 474803 | || || || ||||| || || ||||| || || || || ||||| || || || | Sbjct 1851994 TCACAGTCCCGGCATACTTCAACGATTCACAGCGCCAGGCCACTAAGGACGCTGGTGCTA 1852053 Query 474804 TTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATG 474863 |||| || || || || | | || || |||||||| |||||||| |||||||| || | Sbjct 1852054 TTGCCGGACTCAACGTACTCAGGATCATCAATGAACCCACAGCAGCGGCACTTGCCTACG 1852113 Query 474864 GTCTTGATAAGAA 474876 || | |||||||| Sbjct 1852114 GTTTGGATAAGAA 1852126 >seq162 Length=620880 Score = 136 bits (150), Expect = 3e-26 Identities = 335/501 (67%), Gaps = 8/501 (2%) Strand=Plus/Plus Query 474371 GTTTGGCAAAATGGTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCA 474430 || ||||| | || ||||| || ||||| ||||| || ||||| |||||||| |||||| Sbjct 253001 GTGTGGCAGCACGGAAAAGTCGAGATAATCGCCAACGATCAAGGAAATAGAACGACACCA 253060 Query 474431 TCATATGTTTCTTTTACTGAAACTGA-ACATCTTATTGGAGATGCTGCTAAATATCAAGC 474489 ||||| || | || || || || || | || | || || ||| |||| || |||||| Sbjct 253061 TCATACGTGGCCTTCACCGACACAGAGAGAT-TGATCGGCGATTCTGCCAAGAATCAAGT 253119 Query 474490 TGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGA 474549 ||| ||||| || || | || ||||| ||| || | || |||||| || || Sbjct 253120 TGCCATGAATCCCACCAACACAGTGTTCGATGCCAAACGACTCATCGGTCGTCGTTACGA 253179 Query 474550 TGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGG 474609 ||| | | || || || || || ||||| ||| |||||||| | || || Sbjct 253180 TGACGCAAAGGTGCAGCAGGACCTGAAGCACTGGCCATTTGCAGTGATAAACGAGGGGGG 253239 Query 474610 TAAACCATATAT--AGAAGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAA 474667 || || | || || | ||| || ||| || | ||| || | || || | Sbjct 253240 AAAGCCGAAGATCCAGGTGGAATTCAA--AGGCGAGAGGAAAGTCTTCGCCCCCGAGGAG 253297 Query 474668 ATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA 474726 || ||| ||| | | ||| |||| | || || ||| ||| ||| ||| | Sbjct 253298 ATAAGTTCGATGATCCTGATCAAGATGAGGGAGACGGCTGAGG-CATTTCTCGGATCCAA 253356 Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||| || || || || || |||||||| |||||||||||||| || ||||| || || Sbjct 253357 AGTCCGAGACGCCGTGATAACAGTTCCAGCGTATTTTAATGATTCCCAGCGTCAGGCGAC 253416 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 || || ||||| || ||||| || ||||| |||| || || || ||||| || || Sbjct 253417 GAAGGACGCGGGGGCCATCGCAGGACTCAATGTCCTACGGATCATAAACGAACCGACCGC 253476 Query 474847 AGCCGCACTTGCTTATGGTCT 474867 ||| || || ||||| ||||| Sbjct 253477 AGCGGCTCTAGCTTACGGTCT 253497 Score = 104 bits (114), Expect = 2e-16 Identities = 101/130 (78%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 474735 ATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATG 474794 ||||||| | ||||| ||||| ||||| || |||||||| | |||||||||||||||| Sbjct 49824 ATGCAGTTGTCACTGTCCCAGCGTATTTCAACGATTCTCAGAGGCAAGCAACTAAAGATG 49883 Query 474795 CGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCAC 474854 | || |||||| ||||| || || | || | || || ||||| || || ||||||| Sbjct 49884 CTGGTCAAATTGCTGGTCTCAACGTCCTCCGAGTCATCAACGAACCGACGGCTGCCGCAC 49943 Query 474855 TTGCTTATGG 474864 |||| ||||| Sbjct 49944 TTGCCTATGG 49953 Score = 96.9 bits (106), Expect = 2e-14 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 476036 GGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATT 476095 |||||| | || | | || |||||||| ||||||| |||| |||| |||||| Sbjct 51203 GGTGAACGTGAAATGGCCAATGATAATAAGCTACTTGGACAATTTACACTTGTTGGTATT 51262 Query 476096 CCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGT 476155 || || ||||| | |||||||| || || |||||||||||||| |||||||| ||||| Sbjct 51263 CCACCAGCTCCACGTGGAGTTCCACAGATCGAAGTTACTTTTGACATTGATGCCAATGGA 51322 Query 476156 ATTCTTAATGTTACTGCTTGTGATAA 476181 ||| | |||| ||||| | || || Sbjct 51323 ATTGTCCATGTATCTGCTAGGGACAA 51348 >seq10 Length=2352850 Score = 118 bits (130), Expect = 7e-21 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || ||||| ||||| || ||||| || ||||||||||| || ||| Sbjct 818971 CGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTT 818912 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| ||| || || ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct 818911 CTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCC 818852 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 || ||||| || ||||| ||||||| |||||| || |||| Sbjct 818851 TCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAG 818809 Score = 118 bits (130), Expect = 7e-21 Identities = 124/163 (76%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || ||||| ||||| || ||||| || ||||||||||| || ||| Sbjct 819655 CGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTT 819596 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| ||| || || ||||| ||||| || || |||||||| || || ||||| ||||| Sbjct 819595 CTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCC 819536 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 || ||||| || ||||| ||||||| |||||| || |||| Sbjct 819535 TCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAG 819493 Score = 114 bits (126), Expect = 8e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || ||||| ||||| || ||||| || ||||||||||| || ||| Sbjct 819199 CGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTT 819140 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| ||| || || ||||| ||||| || || | |||||| || || ||||| ||||| Sbjct 819139 CTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCC 819080 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 || ||||| || ||||| ||||||| |||||| || |||| Sbjct 819079 TCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAG 819037 Score = 114 bits (126), Expect = 8e-20 Identities = 123/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 |||||||| || ||||| ||||| || ||||| || ||||||||||| || ||| Sbjct 819427 CGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTT 819368 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 ||| ||| || || ||||| ||||| || || | |||||| || || ||||| ||||| Sbjct 819367 CTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCC 819308 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 || ||||| || ||||| ||||||| |||||| || |||| Sbjct 819307 TCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAG 819265 Score = 89.7 bits (98), Expect = 3e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480606 AGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGA 480665 ||||| ||| |||||| | ||| || ||||| || || ||||||||||| || |||||| Sbjct 820741 AGAGTCCTGCCATCTTCCAATTGTTTACCAGCGAAGATGAGACGTTGTTGGTCTGGAGGA 820682 Query 480666 ATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTT 480725 ||||| || || || || ||||| ||||| |||||| || |||| | | Sbjct 820681 ATTCCCTCTTTATCCTGGATCTTCGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACT 820622 Query 480726 TCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || || |||||||| || ||||| || Sbjct 820621 TCGAGTGTGATGGTCTTGCCAGTCAGAGTCTTGACAAAAATCTG 820578 >seq79 Length=2327644 Score = 105 bits (116), Expect = 4e-17 Identities = 248/369 (67%), Gaps = 8/369 (2%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 || ||||| || ||||| || || || |||||||| || || | || | || || || Sbjct 2169390 AACCCTGACGAGGCTGTGGCTTACGGCGCTGCTGTGCAGGCTGGCGTTCTCTCTGGGGAA 2169331 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTT 475912 ||| || ||| | | ||||| ||| |||| || | ||| | | | ||| | Sbjct 2169330 -CAG----GACACTGA-TGCCATTGTTCTTCTTGATGTTAATCCCTTGACCATGGGTATC 2169277 Query 475913 GAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTAT-CCCATGCAA 475971 || || |||||||| | |||||||| || || || |||||| || |||| | || Sbjct 2169276 GAGACTGTTGGAGGAGTCATGACTAAGCTCATCCCAAGGAATACTGTCATTCCCACG-AA 2169218 Query 475972 AAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCTT 476031 || || | |||| || || |||||| || || ||||| ||||| || | | Sbjct 2169217 GAAGTCGCAGATATTCTCGACAGCTTCTGACAACCAGCACACTGTCACCATTCAGGTTTA 2169158 Query 476032 TGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGG 476091 || |||||| || | | || || || ||| | ||||||| || |||| || Sbjct 2169157 CGAGGGTGAACGACCAATGACGAAGGACAATCATCTTCTTGGAAAGTTCGATCTCACTGG 2169098 Query 476092 TATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAA 476151 ||||| || || ||||| ||| | ||||| ||||| || || ||||| || ||||| || Sbjct 2169097 GATTCCCCCAGCGCCCAGGGGAATCCCTCAGATTGAGGTGACCTTTGAGATCGATGCCAA 2169038 Query 476152 TGGTATTCT 476160 ||||||||| Sbjct 2169037 TGGTATTCT 2169029 >seq1175 Length=89672 Score = 102 bits (112), Expect = 5e-16 Identities = 239/358 (67%), Gaps = 2/358 (1%) Strand=Plus/Minus Query 355200 ATTTTCATGAATGTCTCTTGGATTACATGGTGGAACATTTGTTGAATATCCAGTGCCAAT 355259 ||| ||| ||| || || |||||| | |||| ||||| | ||||| ||||| Sbjct 45377 ATTCTCAATAATCTCCCTGGGATTATAATTAGGAATTTTTGTCATCCAGCCAGTCCCAAT 45318 Query 355260 ACCTTCTGTTCCATTAACTAAAATCATTGGAATTACAGGTACATAAAATACTGGTTCAAT 355319 ||| || | |||||||||||| | |||||| || | || | ||| || || || ||||| Sbjct 45317 ACCATCAGCTCCATTAACTAATACCATTGGTATAATGGGAATATAGAAAACAGGCTCAAT 45258 Query 355320 CATTTTATTATCTTCAAATTGATGTTGCAATACATCAAAATCATGTTGTAT-GAAAATAT 355378 | | | || ||| ||| | | ||| | | || | | |||||||| ||| ||| || Sbjct 45257 CTTCTGATGATCATCATACTCATGCTTGAGTAAAGCGTCATCATGTT-TATGGAAGATGA 45199 Query 355379 ATTTAGTTAATTGATTGAGTTGTGTGAAGATATATCGTGCACTTGCATTATCTTTGCCTC 355438 || | | || | | |||| | ||| || || | |||| ||| ||||| || | Sbjct 45198 ATCTTGCTAGTGAACTGAGCCGAGTGTGAATGTACCTACCACTAGCAGAGTCTTTCCCCC 45139 Query 355439 CACTTAATCTTGTACCAAATTGACCATTGGGAAGTAATAAATTTATGTTGTTACTTCCAA 355498 | || ||||| || ||||| |||| | || | ||| ||||| || || |||| Sbjct 45138 CTTGCGCCCTGGTACCGAACTGACCGATGGGCATCAACAGATTGATGTTATTGCTGCCAA 45079 Query 355499 CATAATTTTGTGCCATTTTTATTATAGTTTCAGTCATTGACTGTTCTCCATGATGATA 355556 || | || || || | || || |||||| |||| |||| ||||||||||| || Sbjct 45078 CAAAGTTCTGAGCGAGATTGATGATAGTTGTCGTCAGTGACATCTCTCCATGATGGTA 45021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268008993227264