Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_020203.1 Length=37095 Score E Sequences producing significant alignments: (Bits) Value seq3688 618 1e-172 seq3855 136 9e-28 seq1892 131 4e-26 >seq3688 Length=22785 Score = 618 bits (684), Expect = 1e-172 Identities = 927/1307 (71%), Gaps = 25/1307 (2%) Strand=Plus/Plus Query 13831 CCGGACGGCCAGCACGAAGCCATTGCGGCGCCGCGTGGTAATGCCAAGTCCACCCTGGTG 13890 ||| | ||| |||| || ||||| || ||||||||||| | |||||||| || ||||| Sbjct 6451 CCGAAAGGCGAGCAGGACGCCATCGCCGCGCCGCGTGGGGAGGCCAAGTCAACGCTGGTC 6510 Query 13891 AGCCAGATATTCGTGATCTGGTGCGTACTCACCGGCCGCAAGCATTACCCCCTGATCATC 13950 |||||| | || ||| | ||||| | | |||| |||||| || ||||| | | Sbjct 6511 AGCCAGCTGTTTGTGCTGTGGTGTCTGGTGCGCGGCATCAAGCACTATGCCCTGGTGGTG 6570 Query 13951 ATGGATGCCTTCGAACAGGCCGCCACGATGTTGGAGGCGATCAAGGCGGAGCTGGAGTTC 14010 |||||| || |||| |||||| | ||||| | || || |||||||| |||||||| ||| Sbjct 6571 ATGGATTCCATCGACCAGGCCTACCCGATGCTCGAAGCCATCAAGGCCGAGCTGGAATTC 6630 Query 14011 AACCCGCGCCTGGCCATGGACTTCCCCCAGGGCGCCGGCAAGGGCCGCGTCTGGCAGGTC 14070 ||||| || ||| ||||||||| | | | ||||| ||| |||||||||||| | Sbjct 6631 AACCCCCGGCTGCTGGCTGACTTCCCCGAAGCCTGCGGCATGGGGCGCGTCTGGCAGATG 6690 Query 14071 GGCACCATCGTTACGGCGAACGATGCCAAGGTCCAGGTCTTCGGCTCCGGCAAGCGGATG 14130 ||||||||| | ||| |||||| |||||| ||||| |||| ||| || | || Sbjct 6691 GGCACCATCCTGACGCGCAACGATATCAAGGTGCAGGTGGCCGGCAGCGGTAAAAAGCTG 6750 Query 14131 CGCGGCCTTCGACACGGCCCGCACCGTCCTGACCTGGTGATCGGCGACGACCTGGAGAAC 14190 |||||||| || ||||| ||| |||| |||||||||||||| ||||| | |||||| Sbjct 6751 CGCGGCCTGCGCCACGGGCCGTACCGCCCTGACCTGGTGATACTGGACGATATTGAGAAC 6810 Query 14191 GACGAGAACGTCCGCAGCCCGGAGCAGCGCGACAAGCTGGAAAACTGGCTGAAGAAAACC 14250 |||||| | || |||| |||||| |||||||||||||||||||||||||||| |||||| Sbjct 6811 GACGAGCAGGTACGCAACCCGGACCAGCGCGACAAGCTGGAAAACTGGCTGAGAAAAACC 6870 Query 14251 GTTCTGTCCCTCGGCTCGGCCGACGACACCATGGACGTGATCATCATCGGGACCATCCTT 14310 || ||| | || || || | || | | || ||| || ||||| |||||||| Sbjct 6871 GTGCTGCCGCTGGGTGGTGCGGGCGCAAAACTCGATGTGGTCTATATCGGCACCATCCTG 6930 Query 14311 CACTACGACTCGGTCCTGTCGCGCCTGCTGAAAAACCCGCTGTGGAAGC-GGCGCAAGTT 14369 || ||||||||||| | || ||| ||||| |||||||| ||| || ||||| || Sbjct 6931 CATTACGACTCGGTGTTATCACGCACCCTGAATAACCCGCTATGGCGGCAGGCGC-GCTT 6989 Query 14370 CAAGGCGATCATCGAATGGCCGCACCGCATGGACCTGTGGGAGAAGTGGGAGGAACTTCT 14429 ||||| | | | |||||| | || ||||||||| |||||| | | | Sbjct 6990 TAAGGCCCTGCGCCAGTGGCCGGTGAACCTGTCGTTGTGGGAGAGCTGGGAGCAGCGCTT 7049 Query 14430 GCTCAACTCCGACGACGAGGGCGCCGCCGCACTGGCCTTCTACCAGGAACGCGTCGCCGC 14489 || ||| | || || | || |||| || || || | || | ||| Sbjct 7050 GCGTAACCAGGGAGAGGATG----CGGCGCA--GGATTTTTATACGTCACACCGTACCGA 7103 Query 14490 CATGGAGGACGGCGCGATCATCTGCTGGCCGGATGGGCAGCCCCTCTACAAACTCATGGT 14549 |||||||| |||||| ||| |||| | | ||| || || | || ||| Sbjct 7104 GATGGAGGAAGGCGCGGAAGTCTCCTGGTCCGCACGGCCGCTGCT---GACCCTGATGCA 7160 Query 14550 GAAACGTGCCCGCGATGGGCACTCGGCGTTCGACTCGGAACAGCAGAACGACCCTGTCCA 14609 | || ||||| || || ||| | | || || | || | ||||| | ||| ||| Sbjct 7161 TATCCGCGCCCGTGACGGTCACGCCACCTTTGATGCCGAGTACCAGAATGCCCCGGTCAG 7220 Query 14610 GGGCGAAAACGCCCCCTTCGCC----GCCTGCATCACGTTCTGGGTCAACCGCCTGGCGC 14665 || ||| | || | || ||| |||||||| |||||||||||||| || Sbjct 7221 CGGTGAAGATGCGCTGTTTGCCCACTGCCTGCAT----TTCTGGGTCAACCGGCTTAACG 7276 Query 14666 AGTGGATGTTCTACGGCGCGTGCGACCCGTCCCTGGGTAAGCAAGGCTCCAGTCGCGACC 14725 ||||| | |||||||| || |||||||| ||| || ||| || |||| || |||| Sbjct 7277 AGTGGCTTTTCTACGGGGCCTGCGACCCCAGCCTCGGCAAGGCCGGGGCCAGCCGTGACC 7336 Query 14726 C--CAGCGCCATCCTGGTGGGTGGGTTCAATCGGGAAACAGGCGTCCTGGACGTGGTCGA 14783 | |||||| | ||||| ||||| || ||||| | || ||||| ||||| ||||| || Sbjct 7337 CGTCAGCGC--TGCTGGTCGGTGGCTTTAATCGCGCCACCGGCGTGCTGGATGTGGTGGA 7394 Query 14784 GGCTGCCATCCGCAAGCGCCTGCCGGACAAGATCATCGAGGACATCATCACCATGCAGCG 14843 || || |||||||| ||||||||| || ||| | || || | |||| Sbjct 7395 AGCGCAGATACGCAAGCGGCTGCCGGACGCCATTATCAGCAATATTATTGCTCTGCAAAA 7454 Query 14844 GGCCTATCACTGCCTGGTGTGGGGCGTTGAGGCGGTCCAGTTCCAGGAGTTTCTGCGCAC 14903 || || ||||| |||||||||||| |||||||||| ||||| |||||||| |||||||| Sbjct 7455 GGAATACCACTGTCTGGTGTGGGGCATTGAGGCGGTGCAGTTTCAGGAGTTCCTGCGCAC 7514 Query 14904 CGAGCTGGTGAAGCGCTCGGCCAAGGCTGGCT-GCCCAGTACCTGCCCGAGCGATCACGC 14962 ||||||| | |||||| ||| || ||||| | ||| || || || || || || | | Sbjct 7515 CGAGCTGATTAAGCGCGCGG-CACAGCTGGGTCACCCGGTGCCGGCGCGGGCTATTATCC 7573 Query 14963 CACACGCCGACAAGCTACTGCGCATCGAAAGCCTCCAGCCGCACATGGCCAACGGCCTAA 15022 | || ||||||||||| |||| ||||| | ||| ||||| || |||| ||||| || | Sbjct 7574 CCCATGCCGACAAGCTGTTGCGTATCGAGACCCTGCAGCCCCATATGGAAAACGGGCTTA 7633 Query 15023 TCCGTCTGCATCCAAGCCAGACCGTCCTGGAACAACAGCTGCGGCACTTCCCGGCCGCAG 15082 |||||||||| | ||||||||| ||| ||| |||||||| ||||| || ||| | Sbjct 7634 TCCGTCTGCACGCCAGCCAGACCACACTGATACAGCAGCTGCGCCACTTTCCCCGCGCCG 7693 Query 15083 ACCACGACGATGGCCCCGACGCCCTGCACATGCTCTGGATGCTAGCC 15129 |||| ||||| ||||| ||||| ||||| |||||||||| ||| ||| Sbjct 7694 ACCATGACGACGGCCCGGACGCGCTGCATATGCTCTGGACGCTGGCC 7740 Score = 122 bits (134), Expect = 2e-23 Identities = 596/923 (65%), Gaps = 49/923 (5%) Strand=Plus/Plus Query 15390 CATCCTGGTCGAGGCCGAACAGGGCAACCTCCAAGCCCAAGCCGAACTGTTCATGGACAT 15449 ||||||| ||||||||| ||||| |||| || || || ||||| | || || Sbjct 7970 CATCCTGAGCGAGGCCGAGCAGGGGCACCTGGTGCGTCAGGCTGACCTGTTTTTTGATAT 8029 Query 15450 GGAGGAACGCGACGCCCACCTGTTCGCCGAAATGAGCAAGCGAAAGCGCGCAATCCTTG- 15508 |||||| ||||||| |||||| || ||||| ||||||||||| ||| | || || Sbjct 8030 GGAGGAGCGCGACGGCCACCTTTTTGCCGAGATGAGCAAGCGC---CGC-CGTTCGGTGA 8085 Query 15509 -GCCTGG-ATTGGGCGG-TCGAGCCCCCGCGTAACGCCTCGGCGGCCGAGAAAGCCGATG 15565 ||| | |||| | | ||| |||||| | || ||| || |||| ||||| Sbjct 8086 TGCCGCTCACCTGGCGCATTGTGCCGCCGCGTCATCCCAATGCGCAGGA-AAAGGCGATG 8144 Query 15566 CCG-ACTACCTGCACGAGCTGTTGCTCGACCTGGAAGGGCTGGAGGACTTGCTGCTCGAT 15624 || || | | ||| ||| |||||| | | | || ||||| |||| Sbjct 8145 GCGGACGCCGCGACCGAATGGTTTTCAGACCTGCCGGAGTTTGAAACGCTGCTGTTCGAC 8204 Query 15625 GCGCTGGACGGCATCGGCCACGGCTA--CAGCTGTATCGAGCTGGAGTGGGCGTTACAAG 15682 |||||||| ||| |||||||||| | || || || ||| |||| ||| Sbjct 8205 TTGCTGGACGCCATTGGCCACGGCTTTGCCGCCGTG--GAAATGGTGTGGAA---ACA-- 8257 Query 15683 GGCGCGAG-----TGGATGCCGCTG-GCGTTCCACCACCGACCGCAGAGCTGGTTCCAG- 15735 |||| | ||| |||| ||| || ||| || | || ||||| ||||||||||| Sbjct 8258 GGCGGAAAACATCTGGCTGCC-CTGTGCCTTCTACAAGCGCCCGCAACGCTGGTTCCAGA 8316 Query 15736 -CTCAACCCCGAAGACCAGAACGAGCTGCGGCTGCGCGACAACAGCCCGGCCGGCGAAGC 15794 | |||||| | |||| |||| | || ||| ||| ||||| | ||| | | Sbjct 8317 CCGCAACCC--ATGACCGTAACGCTATCCGCCTGATTGACGGCAGCCTTGACGGTGCTGA 8374 Query 15795 CTTGCAGCCCTTCGGCTGGATCATTCACCGGCCGCGTGCGCGCTCCGGCTATGTGGCCCG 15854 | | ||||| |||||| | | || || | | || ||||| || ||| Sbjct 8375 GCTTAATCCCTTTGGCTGGCTGCTGCATCGCCATCAGGCCAAAAGCGGCTGGGTAGCCGA 8434 Query 15855 CAGCGGCCTGTTCCGCGTGCTGGCCTGGCCGTACCTGTTCCGCCACTACGCCACCTCCGA 15914 ||||| |||||||| || |||| ||| | ||||||||| | || || || Sbjct 8435 AAGCGGTCTGTTCCGGGTACTGGTGTGGACCTACCTGTTCAAGAATATTGCTGCCCGTGA 8494 Query 15915 CCTGGCGGAAATGCTGGAAATCTATGGCCTGCCGATCCGGCTGGGGAAATA-TCCGCCAG 15973 |||||||||| | ||||||||||| |||||||||| ||| |||| | || |||| | | Sbjct 8495 CCTGGCGGAATTTCTGGAAATCTACGGCCTGCCGACGCGGGTGGGCACCTATTCCGACGG 8554 Query 15974 GTACTGCCGACGAGGAAAAGGCAACCT--TGCTGCGGGCCGTTACCGGCCTGGGTCACGC 16031 | | | || || |||||| ||| | ||||| |||| | || |||||| || Sbjct 8555 GGCCAG-TGAAGAAGAAAAG--AACATGCTGCTGTGGGCGCTGCGCGACCTGGGGCATAA 8611 Query 16032 TGCCGCTGGGATCATCCCCGAAACCATGGCCATCGACTTCCAGCAGGCGGCGCAGGGCAG 16091 |||| || || |||| |||| || || ||| ||| || || || ||||| | Sbjct 8612 CGCCGGCGGCATTATCCACGAACGCACCGCGATCCGCTTTGAGTCCGCCGCCCAGGG--G 8669 Query 16092 CAG--CGAGCCGTTCCTGGCGATGATGCGGCAAAGCGAAGACGCCATATCCAAGGCGGTC 16149 ||| ||| ||||||| | ||||||| | ||||| | || ||||||| | Sbjct 8670 CAGGTCGACCCGTTCCAGTATATGATGCAGTGGTGCGAAAGCACCCAGTCCAAGGTCATT 8729 Query 16150 CTGGGCGGTACCCTGACCAGCACCACCAGCCAGTCAGGC---GGCGGCGCTTTTGCCCTG 16206 |||||||| |||||||||| |||| | | | ||| || || | ||||| Sbjct 8730 CTGGGCGGCACCCTGACCA-----CCCAGGCGGAC-GGCAAGAGCAGCACCAACGCCCTA 8783 Query 16207 GGCCAGGTACATAACGAGGTTCGGCACGACTTGCTGGCATCCGATGCCCGCCAATTGGCG 16266 ||| | || |||||||| || || ||||| || || |||||| || |||| Sbjct 8784 GGCAACGTGCATAACGAAGTGCGCCACGAGCTGACCGCCAGCGATGCGGTGCAGCTGGCC 8843 Query 16267 GCAACGTTGTCCCGCGATCTGCT 16289 | ||| || |||| || ||||| Sbjct 8844 GGCACGCTGACCCGTGACCTGCT 8866 Score = 109 bits (120), Expect = 1e-19 Identities = 162/228 (71%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 17168 CCGCCTGGATACCATCTACCAGACCAACATGCAGTCGGCCTACATGGCAGGGCGCTAC-- 17225 ||| ||||| ||||| | | ||||| | || || ||||| ||||| |||||||| Sbjct 9714 CCGGCTGGAGACCATTTTTCGCACCAATACCCAATCTGCCTATATGGCCGGGCGCTATCA 9773 Query 17226 GCGGCCGCCTACGAAGCCAGGGAAACCCACCCTTACTGGATGTATGTGGCGGTGATGGAT 17285 ||||| || ||| | || | || |||||| |||||||||||||||||| Sbjct 9774 GCGGCTGCGCGAGAA--CGTCGACCAGCGGCCCTACTGGCAGTATGTGGCGGTGATGGAC 9831 Query 17286 GGCGTTACCCGGCCCAGCCATGCCGCCCTGCATGGGAAAGTGTTCAGGTGGGACGATCCG 17345 || ||||| |||||||||||||| |||||||| |||||| | | |||||| || Sbjct 9832 AGCCACACCCGCCCCAGCCATGCCGCGCTGCATGGCCGGGTGTTCCGTTATGACGATGCG 9891 Query 17346 ATCTGGCAGCACATCACCCCGCCCAATGGCTACAACTGCCGGTGCCGG 17393 |||| | | | ||||| || |||||||||||||| |||||| Sbjct 9892 GGCTGGGATACCCTGTTTCCGCCGAACGGCTACAACTGCCGCTGCCGG 9939 >seq3855 Length=27953 Score = 136 bits (150), Expect = 9e-28 Identities = 231/331 (70%), Gaps = 8/331 (2%) Strand=Plus/Minus Query 20853 CAACACCTATGGCTGGCTGGGGCAGTTCCCCAAGCTGCGCGAGTGGATCGGTCAGCGTGT 20912 ||| ||||| ||||||||||||||||| ||| | | || |||||| |||| ||| Sbjct 12039 CAATACCTACGGCTGGCTGGGGCAGTTTCCCGCGTTCCGGGAGTGGGTCGGCTCGCGCAG 11980 Query 20913 CATCAAGGACATGGCGGCCCAGGGCTACCAGATCACCAACAAGCTCTTCGAATCGACCGT 20972 ||| || | ||| || | | |||||| |||| ||||||| || ||| || || Sbjct 11979 TATCCAGCAGATGAAGGTCTATGGCTACGCCATCAACAACAAGACCTATGAAGGCACGGT 11920 Query 20973 GGGCGTAAAACGTACCGACATCGAGGACGACAACCTCGGCGTCTACGGACCGCTCATGCA 21032 | | | | || || | ||||| ||||| ||||||| || | ||||| | || Sbjct 11919 CGCCATTACCCGCGATGATTTTGAGGATGACAATCTCGGCGCGTATAGCCCGCTGTTTCA 11860 Query 21033 GGAAATGGGGCGCGCTGCCGGCGCGCATCCCGACGAGCTGGTCTT---CGCCCTGCTCAA 21089 ||||||||| ||||| |||| ||| || || || |||||||| || |||| ||| | Sbjct 11859 GGAAATGGGCCGCGCCGCCGCCGCACAACCGGATGAGCTGGTGTTTACCGCCTTGCGC-- 11802 Query 21090 GGCCGGCAACGCCAATCTCTGCTACGACGGTCAAAAC-TTCTTCGACACCGATCACCCGG 21148 | |||||| | |||||||||||| |||| | || || || | ||| || |||| Sbjct 11801 -GACGGCAATAAAACCGACTGCTACGACGG-CAAACCTTTTTTTGATAGCGAACATCCGG 11744 Query 21149 TCTATCCGAACGTGGATGGCACCGGCACGGC 21179 | ||||| || || || |||| |||||| || Sbjct 11743 TGTATCCCAAGGTCGACGGCAGCGGCACCGC 11713 >seq1892 Length=4253 Score = 131 bits (144), Expect = 4e-26 Identities = 180/252 (71%), Gaps = 0/252 (0%) Strand=Plus/Minus Query 12601 ATGGCGCACCCGAAGGAAACCCGCGACGCCTTGCGCCGCGCCTATGTCCTCGACCGGCAG 12660 |||||||||||| |||||| ||||||| | |||| || |||||| | ||| | | | Sbjct 391 ATGGCGCACCCGCAGGAAATCCGCGACACGCTGCGACGGGCCTATATTTTCGGGCAGATG 332 Query 12661 TCCCTTGAGGTCGCGGCCGCCATGTTCGGCGTCTCCTACGGCACCGCCCGCCGCTGGAAA 12720 ||||||||| | || ||||| | ||||| | | ||| || || || ||||||||| Sbjct 331 TCCCTTGAGATTGCCGCCGCGCAATCGGGCGTTGCGTTCGGAACGGCACGGCGCTGGAAA 272 Query 12721 CAGCAGGCGGAAGCCGAGGGGGACGACTGGGACAAGGCGCAATCGGCGCAGTTGCTGGCC 12780 | | || | | || ||| || |||||||||||| || | ||||| || |||| Sbjct 271 AAAGACGCTCAGGACGCGGGTGATGACTGGGACAAGCAGCGGGCTGCGCATATGATGGCG 212 Query 12781 GGTGGTGGGCTGGAGGACGTGGCGCGCCAGGTGCTGGCCGGCCTGGTGACTCAGTTCCAG 12840 || ||||| |||||||| | | ||| ||| | |||| ||||| || |||| |||| Sbjct 211 GGCGGTGGTCTGGAGGATATTGGCCGCGCGGTATTAACCGGGCTGGTAACGCAGTACCAG 152 Query 12841 GCCACGATGGAA 12852 ||||| ||||| Sbjct 151 ACCACGCTGGAA 140 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118576812397312