Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq2351 181 1e-40 >seq2351 Length=10305 Score = 181 bits (200), Expect = 1e-40 Identities = 319/460 (69%), Gaps = 10/460 (2%) Strand=Plus/Minus Query 133799 TGCAGACCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAAT 133858 |||| |||||||| || ||||| | |||||| | || || || ||||||||| | Sbjct 2980 TGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCCACGGTTGTTCTTCAGC 2921 Query 133859 ACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 133918 |||| |||| |||| || || |||||||||| || ||| | | || || || || || Sbjct 2920 ACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAACGTTGCCGCTCCGCCG 2861 Query 133919 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 133978 || |||||||| || || || ||||| ||||| ||||| |||||||| |||||||||| Sbjct 2860 CGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATGTTTATAGAAAGGAATA 2801 Query 133979 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 134038 ||||||||| | |||| ||| | ||| || || ||||| |||| Sbjct 2800 CAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAGCGCACGAATACGACCG 2741 Query 134039 GCGTTGATGCCGATACCAGCTCGCTTGCTGATA--TACTT---AATAATACTGTTACTTG 134093 ||||| ||||||||||| || |||| ||| | || || ||| |||| | || Sbjct 2740 GCGTTAATGCCGATACCGGCACGCT--GTGAAACGTATTTCACGATAGCACTG-GAGGTG 2684 Query 134094 CCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGAC 134153 || ||||| |||| ||| ||||| ||||| | || || || || ||||||| Sbjct 2683 --GCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGAGCTGAACTGAC 2626 Query 134154 GAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGGCGAGTAGATA 134213 | || || ||||| | || | ||| ||||| || ||||||||||||| | ||||| | Sbjct 2625 GGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCTTGAAGGTAGAAA 2566 Query 134214 CAGCATCATAAAAACGAATAATATGAGCCAGACGATTTTC 134253 || ||||| || || | | | | ||||||| |||| Sbjct 2565 TCGCGTCATAGAAGCGTTTGACGTAATCCAGACGCGTTTC 2526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512553776071680