Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq3282 109 1e-19 seq2452 100 7e-17 >seq3282 Length=7904 Score = 109 bits (120), Expect = 1e-19 Identities = 198/288 (69%), Gaps = 4/288 (1%) Strand=Plus/Minus Query 25793 TCAGTAGTGTACTGATCTTGACCTTGCTGGTTCTGCCACTTGCGCGTGCGCAACTTGCCT 25852 || || || || |||| || || ||| | |||||| || |||||||||| | ||| Sbjct 7556 TCCGTGGTATAACGATCCTGCCCGCTCTGATCCTGCCATTTACGCGTGCGCAGTTGACCT 7497 Query 25853 TCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTCTGCCAACTTCCCG 25912 |||| || | || |||||||||||| ||| || || ||||| || |||| ||| ||| Sbjct 7496 TCAACATACACCTGTGAGCCTTTGCGCAGGTATTCTCCAGCCACTTCAGCCAGCTTTCCG 7437 Query 25913 TATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGTCTGCTTGTCTTTG 25972 || | | || |||||||| ||||| ||| | ||| || ||||||||||| Sbjct 7436 TACAGCGTGACGCGGTGCCATTCTGTGCGCTCTTTCTGCTCACCGGTCTGCTTGTC--GC 7379 Query 25973 TACTGCTCACTG--GTGGCAATGCTTAAATTTGCCACGGCGGTACCGTTAGGCATATACC 26030 | | | ||| ||||| | | | || || ||||| |||||| |||| ||| | Sbjct 7378 GCCAGGTATCTGACGTGGCCAGAGTCAGGTTAGCAACGGCACCACCGTTCGGCAGATAAC 7319 Query 26031 TAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTTAA 26078 ||||||||||| || || | || ||||||| || || || |||| Sbjct 7318 GGACTTCCGGGTCTTGCCCCAGATTCCCGACAAGAATCACTTTATTAA 7271 >seq2452 Length=2364 Score = 100 bits (110), Expect = 7e-17 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 25772 CCGCCAGGACCGACAACAATCTCAGTAGTGTA-CTGATCTTGACCTTGCTGGTTCTGCCA 25830 |||||| | ||||||| | || || ||||| ||| ||||| ||| ||||| ||||| Sbjct 2179 CCGCCAATATCGACAACTACTTCCGTTGTGTATCTG-TCTTGCCCTGACTGGTCTTGCCA 2121 Query 25831 CTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCC 25890 ||| | |||||||| | ||| || || || | || || || |||||| || || || Sbjct 2120 CTTCCTTGTGCGCAATTGGCCCTCGATATATACCTGCGAACCCTTGCGTAGATATTCACC 2061 Query 25891 GGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGG 25950 ||||||||||||||||| ||||| | | || || ||||| || || || | | Sbjct 2060 AGCCACCTCTGCCAACTTTCCGTACAGCGTGACGCGATGCCATTCCGTGCGCTCCTTCTG 2001 Query 25951 CTGCCCTGTCTGCTTGTCT 25969 || || |||||||||||| Sbjct 2000 CTCTCCAGTCTGCTTGTCT 1982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123654973103104