Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq14 176 5e-39 >seq14 Length=2234412 Score = 176 bits (194), Expect = 5e-39 Identities = 799/1248 (64%), Gaps = 38/1248 (3%) Strand=Plus/Plus Query 75702 CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTT 75761 |||||||||| || || | |||||||| || || ||| | |||| ||| | | Sbjct 231721 CCCTGTGGATACCCGATTTGTTCATGAAACGTGTCAAGGCAGACGGTCCCTGGAGTTTGA 231780 Query 75762 TCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCT 75821 | || || || || ||||| |||| ||| | ||||||||| || || || | Sbjct 231781 TGTGCCCCCACGAGTGTCCAGGCCTCTGTGACACTTGGGGTGAGGAATTCGATAAGCTGT 231840 Query 75822 ACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT-GTACCAGCCGCCGATGTTTGG 75880 |||||||||| || ||||||| | | ||| ||| | || |||||| || | ||| Sbjct 231841 ACACAAAGTACGAGGAGGAGGCTCGTTACAA-GCGTCAAGTGCCAGCCCGTGAGCTGTGG 231899 Query 75881 AAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCT 75940 | || ||||| | ||||| ||||||||||| || || ||||| ||||||||||| Sbjct 231900 ACAGCAATTCTAATGTCACAAGTTGAGACTGGAACTCCCTACATGCTGTACAAGGATGCC 231959 Query 75941 TGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACG 76000 || |||| ||| || || ||||| | |||||||| || || || | ||||| Sbjct 231960 TGCAACAGGAAATCCAATCAGAAGAACCTTGGAACAATAAAATGCAGCAACTTGTGCACC 232019 Query 76001 GAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCC 76060 || || | |||||| | ||||| ||||| |||||||||||||| || || Sbjct 232020 GAGATCGTTGAGTACTCGAGCCCCGATGAAGTTGCTGTCTGCAATTTGGCATCGATAGCA 232079 Query 76061 CTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGA-AAT 76119 | | || ||| || || || || | ||| | || |||| ||| || | | Sbjct 232080 GTCAACATGTTTGTGGATCCAGTGAAGAAGACCTATGACTTCGACAAAC-TCAAGACAGT 232138 Query 76120 C-ACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTG 76178 | ||||| |||| |||| |||||| || | ||||| ||| |||| ||||| |||| Sbjct 232139 CGTCAAAG-TTGTCACCAGAAATCTCGACAGGGTCATCGACGTCAATTACTATCCAGTTG 232197 Query 76179 AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCG 76238 || || || || || ||| ||||| | || || || | || ||||| ||||| | Sbjct 232198 AGGAGGCAAGAGTCTCCAACATGAGACACCGTCCCATGGGAATTGGAGTTCAGGGTCTGG 232257 Query 76239 CGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATG 76298 | |||| ||| | || || || |||| || ||||| ||| || | | || Sbjct 232258 CAGATGCATTCCTACTGATGCGTTATCCATTCGACAGTGATGAGGCCCAGAAACTCAACA 232317 Query 76299 CTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAG 76358 | ||||| || ||| | || | | |||||||||| |||||| | || ||| Sbjct 232318 TCCAGATCTTCGAGACCCTCTACTATGGTGCCCTGGAGGCATCCTGTGAACTCGCCCAAG 232377 Query 76359 CCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTG 76418 | ||| | || ||||| | | || || || | ||| || | || |||| | Sbjct 232378 AGAAGGGTACTTACGAGACGTACAAAGGCTCGCCAGTCAGCCAGGGCATCCTCCAGTACG 232437 Query 76419 ATATGTGGGAAGGTGAAACC----AAGCTCAACTACGACTGGGATGTTCTCAAGG----A 76470 | ||||||| || | ||| || || || ||||||| | ||||||| | Sbjct 232438 ACATGTGGG-GTGTCACACCGACAAACCT---CTGGGACTGGGCTAAACTCAAGGAGAAA 232493 Query 76471 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 76530 | |||| | ||||| | ||| ||| | ||||||||||||||||||| || Sbjct 232494 ATATCTCAACACG--GGGTC--AGGAACTCTCTGCTACTGGCACCAATGCCAACAGCATC 232549 Query 76531 CACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCT 76590 || || || ||| ||||||| || || | | || || ||||| | ||||||||| Sbjct 232550 AACAGCCCAGATCCTGGGTAACAACGAGGCCATCGAGCCCTACACCAGCAACATCTACTC 232609 Query 76591 GAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACCTCAA 76650 || | || | ||||| || | ||||| || ||| | || ||||||| Sbjct 232610 CAGGCGCGTGCTGTCTGGTGAATTCCAGGTCGTCAATCCCCATCTCCTGAAGGACCTCAC 232669 Query 76651 GAAGATTGGTCTCTGGTCCAAGGATATGAAGGATCTCATGGTGAAAGCG---GGTGGTTC 76707 | | ||||||| | | || |||||| ||| || | | |||| ||| || Sbjct 232670 TGAACGCGATCTCTGGGACGACGACATGAAGAATC---TGATAATAGCGAACAATGGGTC 232726 Query 76708 CATTCAAAATATCTCAGATATCCCAGATGATATCAAGAATCTCTACCGCACAGTGTGGGA 76767 || || | |||| | || |||| || |||||| || ||| | ||||| ||||| Sbjct 232727 GATCCAGAGTATCGAGAAAATACCAGCAGACATCAAGGCACTGTACAGAACAGTCTGGGA 232786 Query 76768 AAT---CAAGATGAAAGATGTCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCA 76824 || | ||| | | || || | | ||||| || ||||| || || || |||| Sbjct 232787 GATTCCCCAGA-GGATGA--TCCTGAAAATGGCTGCTGATCGAGGGGCTTTTATCGATC- 232842 Query 76825 AAGTCAAAGT--ATGAATCTATTCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATG 76882 |||| ||| | ||| | ||||| |||||||| |||||| | || ||| Sbjct 232843 -AGTCCCAGTCGACCAATGTTCACATGGCCAGTCCAACCCCTGAGAAGCTCACGTCCATG 232901 Query 76883 CATATGTACGCGTGGAAACAGGGGCTCAAAACCGGAATGTACTATCTC 76930 ||| | | || ||| || || | || || || |||||||||||| Sbjct 232902 CATTTCTTCGGTTGGGAAGCTGGATTGAAGACTGGGATGTACTATCTC 232949 Score = 170 bits (188), Expect = 2e-37 Identities = 584/898 (65%), Gaps = 22/898 (2%) Strand=Plus/Plus Query 75702 CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTT 75761 |||||||||| || || | |||||||| || || || | |||| ||| ||| Sbjct 775274 CCCTGTGGATACCCGATTTGTTCATGAAACGTGTCCTGGCAGACGGTCCCTGGAGTCTGA 775333 Query 75762 TCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCT 75821 | || || || || ||||| |||| ||| | ||||||||| || || || | Sbjct 775334 TGTGCCCCCACGAGTGTCCAGGCCTCTGTGACACTTGGGGTGAGGAATTCGATAAGCTGT 775393 Query 75822 ACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACT-GTACCAGCCGCCGATGTTTGG 75880 |||||||||| || ||||||| | | ||| ||| | || |||||| || | ||| Sbjct 775394 ACACAAAGTACGAGGAGGAGGCTCGTTACAA-GCGTCAAGTGCCAGCCCGGGAGCTGTGG 775452 Query 75881 AAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCT 75940 | || ||||| | ||||| ||||||||||| || || ||||| ||||||||||| Sbjct 775453 ACAGCAATTCTAATGTCACAAGTTGAGACTGGAACTCCCTACATGCTGTACAAGGATGCC 775512 Query 75941 TGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACG 76000 || |||| ||| || || ||||| | |||||||| || || || | ||||| Sbjct 775513 TGCAACAGGAAATCCAATCAGAAGAACCTTGGAACAATAAAATGCAGCAACTTGTGCACC 775572 Query 76001 GAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCC 76060 || || | |||||| | ||||| ||||| |||||||||||||| || || Sbjct 775573 GAGATCGTTGAGTACTCGAGCCCCGATGAAGTTGCTGTCTGCAATTTGGCATCGATAGCA 775632 Query 76061 CTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAAAAACTTCATGA-AAT 76119 | | || ||| || || || || | ||| | || |||| ||| || | | Sbjct 775633 GTCAACATGTTTGTGGATCCAGTGAAGAAGACCTATGACTTCGACAAAC-TCAAGACAGT 775691 Query 76120 C-ACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTG 76178 | ||||| |||| |||| |||||| || | ||||| ||| |||| ||||| |||| Sbjct 775692 CGTCAAAG-TTGTCACCAGAAATCTCGACAGGGTCATCGACGTCAATTACTATCCAGTTG 775750 Query 76179 AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCG 76238 || || || || || ||| ||||| | || || || | || ||||| ||||| | Sbjct 775751 AGGAGGCAAGAGTCTCCAACATGAGACACCGTCCCATGGGAATTGGAGTTCAGGGTCTGG 775810 Query 76239 CGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATG 76298 | |||| ||| | || || || |||| || ||||| ||| || | | || Sbjct 775811 CAGATGCATTCCTACTGATGCGTTATCCATTCGACAGTGATGAGGCCCAGAAACTCAACA 775870 Query 76299 CTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAG 76358 | ||||| || ||| | || | | |||||||||| |||||| | || ||| Sbjct 775871 TCCAGATCTTCGAGACCCTCTACTATGGTGCCCTGGAGGCATCCTGTGAACTCGCCCAAG 775930 Query 76359 CCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTG 76418 | ||| | || ||||| | | || || || | ||| || | || |||| | Sbjct 775931 AGAAGGGTACTTACGAGACGTACAAAGGCTCGCCAGTCAGCCAGGGCATCCTCCAGTACG 775990 Query 76419 ATATGTGGGAAGGTGAAACC----AAGCTCAACTACGACTGGGATGTTCTCAAGG----A 76470 | ||||||| || | ||| || || || ||||||| | ||||||| | Sbjct 775991 ACATGTGGG-GTGTCACACCGACAAACCT---CTGGGACTGGGCTAAACTCAAGGAGAAA 776046 Query 76471 ACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAGCCTC 76530 | |||| | ||||| | ||| ||| | ||||||||||||||||||| || Sbjct 776047 ATATCTCAACACG--GGGTC--AGGAACTCTCTGCTACTGGCACCAATGCCAACAGCATC 776102 Query 76531 CACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTAC 76588 || || || ||| ||||||| || || | | || || ||||| | ||||||||| Sbjct 776103 AACAGCCCAGATCCTGGGTAACAACGAGGCCATCGAGCCCTACACCAGCAACATCTAC 776160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596540010147840