Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq335 104 7e-17 seq101 95.1 4e-14 seq3099 84.2 6e-11 >seq335 Length=516951 Score = 104 bits (114), Expect = 7e-17 Identities = 205/296 (69%), Gaps = 12/296 (4%) Strand=Plus/Plus Query 302575 TCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGCTGTA 302634 |||||| ||| || ||||| | |||||| || ||||| | |||||| ||||| ||| Sbjct 151902 TCCATAGCCTTTATCAAACGTCTCTGAATGTATCCAGTCTCGGCTGTTTTCACAGCAGTA 151961 Query 302635 TCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCG--GTCGT-AGC 302691 || || ||||| |||| || ||||| || ||||| |||| || ||| | || || Sbjct 151962 TCGATGAGACCCTCACGTCCTCCCATGGCGTGGAA--ATAGAACT-CCGAAGGGGTCAGA 152018 Query 302692 CCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGG--CG-AATCGTCGAACTTG 302748 || | | |||| ||||||||||||| | | ||| || || ||||||| |||| Sbjct 152019 CCAGCGAGGTAGGAATTCTCAACGAAACCCCTGGACTCAGGACCGTAATCGTC---CTTG 152075 Query 302749 GTAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTC 302808 | ||||| || || || | || |||| | || || | || || || |||||| Sbjct 152076 ATGAAGTGGGGAAGTGTTCGCTTTCGGAAGCCAAAGGGAATTCTTTTACCCTCGACGTTC 152135 Query 302809 TGCTGTCCCAGGCACGAAATCATCTGCGAAATATTTAAATCACTGCCCTTGGAGCC 302864 |||||||||| ||| | ||| | ||| || || || | | |||||||||||| Sbjct 152136 TGCTGTCCCACGCAGGCAATAACCTGGGAGATGTTGATGTTGGAGCCCTTGGAGCC 152191 >seq101 Length=1657675 Score = 95.1 bits (104), Expect = 4e-14 Identities = 143/201 (71%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 251845 ATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTCAGTCCATCA 251904 || ||||||||| ||| ||||| || ||||||||||| || || ||| ||| ||| ||| Sbjct 578882 ATGGTCATACGAGAGGGGATAGCGTGAGGATTGATGATAATATCTGGTGTCAATCCTTCA 578823 Query 251905 GCAGTGAAGGGCATATCCTTTTCCTCAATAATGTTTCCAATA-GTTCCCTTTTGTCCGTG 251963 || ||| ||||| |||| | | | || ||| ||| | | || |||||||| || || Sbjct 578822 CAAGAGAACGGCATGTCCTCCTGC-CTGTACTGTATCCCACAGGTACCCTTTTGCCCATG 578764 Query 251964 ACGAGAACTGAACTTATCACCAATAACAGGACGGCGAACACTACGAAGGCGAACCTTACA 252023 | ||| ||||| || ||||| ||| | ||||| | | |||| |||||| Sbjct 578763 TCTAGAGGCAAACTTGTCCCCAATCTGTGGAATTCTCACACTCCTCACTCGAATCTTACA 578704 Query 252024 GAAGTTGTAACCATCACCGTT 252044 ||| ||||| || |||| ||| Sbjct 578703 GAACTTGTAGCCTTCACTGTT 578683 >seq3099 Length=8203 Score = 84.2 bits (92), Expect = 6e-11 Identities = 159/230 (69%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 289029 ACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGC 289088 ||| || ||||| ||||| |||||||| || | ||| || | || | |||| | Sbjct 6879 ACCGACGGCATCGATTTCATCAATGAAGATGATACAAGGCGCGGCTTTTTTCGCCTGCTC 6820 Query 289089 AAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGC 289148 || | || | ||||| ||||| || | ||| || ||||||| ||||| |||||| | Sbjct 6819 GAACATGTCACGCACACGAGATGCACCGACACCCACGAACATTTCAACAAAGTCAGAACC 6760 Query 289149 GGATACT-TGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 ||| | |||| ||||| || || ||||| || || | ||| | || || || || | Sbjct 6759 GGAAATGGTGAA-GAATGGCACCTTCGCTTCACCGGCAATCGCCTTGGCAAGCAGGGTTT 6701 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCC 289257 |||||||||| || || || | | |||| | ||||| | | |||| || Sbjct 6700 TACCTGTTCCCGGCGGCCCTACCATCAGAA-TGCCTTTCGGAATTTTACC 6652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471742772793216