Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_021339.1 Length=51077 Score E Sequences producing significant alignments: (Bits) Value seq3623 132 2e-26 >seq3623 Length=36615 Score = 132 bits (146), Expect = 2e-26 Identities = 169/233 (73%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 40250 GAAGTCGATGTCGACATCGGGCATGGACACGCGCTCGGGGTTCAGGAAGCGCTCGAAGAT 40309 |||||||| ||||| || ||||| ||||| || || ||||| ||||| || ||||| | Sbjct 11689 GAAGTCGACGTCGAAGTCAGGCATCGACACACGTTCCGGGTTGAGGAAACGTTCGAACAG 11748 Query 40310 GAGCCCGTGCTCCAGCGGGTCGAGGTCGGTGATCCCGAGGACGTAGGCGACCAGCGAACC 40369 || | || ||||| ||||| |||||||| || |||||| |||||||| || Sbjct 11749 CAGGTCAAATTCAAGCGGATCGAGATCGGTGATTTTCAGTGAGTAGGCCACCAGCGAGCC 11808 Query 40370 GGCCGCAGAGCCCCGCCCAGGGCCGACCCAGACCCCGTTCTCCTTCGCCCAGCGGATGAA 40429 || | ||||| ||||| ||||| ||| ||| |||| || || | ||| |||| || Sbjct 11809 TGCACCCGAGCCGCGCCCCGGGCCTACCGGGACATCGTTGTCTTTTGACCACTGGATAAA 11868 Query 40430 GTCCGCGACGACGAGGAAGTACGACGGGAACCCCATCTGGATGATCATGTCGA 40482 ||| |||| |||||||| ||||||||||||||| |||| | || || Sbjct 11869 CTCCATCACGATCAGGAAGTAGCCAGGGAACCCCATCTGGTTGATAACGTTGA 11921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163317104135424