Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq2351 302 5e-77 seq2333 208 9e-49 >seq2351 Length=10305 Score = 302 bits (334), Expect = 5e-77 Identities = 570/818 (70%), Gaps = 39/818 (5%) Strand=Plus/Plus Query 41456 TTCTCTTACGCTGGTGTTCAGCAGTTGATCGGGAAATATCTGTTGCAGGATCGCACAAAC 41515 ||||||||||||| || |||||||| |||||||||||| |||| | ||| | | Sbjct 2394 TTCTCTTACGCTGCGGTCAAGCAGTTGGAAGGGAAATATCTGGTGCAAAACCGCGTCACC 2453 Query 41516 GGTGACATCTACGAAACCCCGCAATACGCTTTCATG--CTGATTGCTATGTGTCTGCA-T 41572 |||||||||||||||| | | || | || | ||| ||| | ||| || ||| | Sbjct 2454 GGTGACATCTACGAAAGCGCCCAGTTT-CTGT-ATGTACTGGTGGCTGCCTGCCTGTTCT 2511 Query 41573 CAGGACGAAC-CGCGAACCCTGAGCGCATTTAATCATGTGGTTGATTTCTACAACGCAAT 41631 | || | |||||| | | | ||| ||| | || ||| |||| || Sbjct 2512 CCGGTTACCCGCGCGAAACGCGTCTGGATTACGTCAAACGCTT-----CTATGACGCGAT 2566 Query 41632 TTCGGATCGT-AAGCTGTCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGC 41690 ||| | | | ||| | || || || ||||| || ||| | || |||||||| || || | Sbjct 2567 TTCT-ACCTTCAAGATTTCATTGCCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCC 2625 Query 41691 GTCAGTTTTCCAGTTGCGTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTG 41750 ||||||| | ||||| ||||||| | || || |||| ||| | || || Sbjct 2626 GTCAGTTCAGCTCCTGCGTGTTGATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCC- 2684 Query 41751 TAACCTC---TGCGATCGTGAAGTATATTTCACAACGTGCTGGTATCGGTGTAAACGCCG 41807 ||||| ||| |||||||| || ||||||| ||||| |||||||| | ||||||| Sbjct 2685 --ACCTCCAGTGCTATCGTGAAATACGTTTCACAGCGTGCCGGTATCGGCATTAACGCCG 2742 Query 41808 GACATATTCGCGCGATGGGTTCTAAAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGA 41867 | | |||||| ||| ||||| || || |||||||||||| | ||||| ||| | Sbjct 2743 GTCGTATTCGTGCGCTGGGTAGCCCGATTCGCGGTGGTGAAGCATTCCATACTGGCTGTA 2802 Query 41868 TCCCGTTCTGGAAACATATTCAGACAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTG 41927 | || |||| |||||| | ||||| || || |||||||| ||||| || ||||| || | Sbjct 2803 TTCCTTTCTATAAACATTTCCAGACCGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCG 2862 Query 41928 GTGGTGCTGCAACGTTGTATTATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTC 41987 | || || |||||||||| ||| ||| | |||||| ||||||| |||| ||||||||| | Sbjct 2863 GCGGAGCGGCAACGTTGTTTTACCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGC 2922 Query 41988 TGAAAAACAACAAAGGTGTTGAAAACAACCGTATCCGTCACCTGGATTATGGCGTACAGC 42047 |||| |||||| || || ||| |||||| | |||||||| ||||| ||||| ||| Sbjct 2923 TGAAGAACAACCGTGGCGTGGAAGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGT 2982 Query 42048 TTAACGATTTGATGTATAAACGTTTGATGAATAACGATTACATCACTCTGTTCAGCC--- 42104 | ||| | |||||||| | || || | || | | ||||| |||||||||| Sbjct 2983 TGAACAAGCTGATGTATCAGCGCCTGGTCAAAGGACAAGAAATCACCCTGTTCAGCCCCT 3042 Query 42105 CTGATGTTGCTAACGATCGTCTGTATGATGCGTTCTATCAAGCGGATCAGACTGAATTCG 42164 |||| || | || | |||||||| || || | || || |||||| ||| |||| Sbjct 3043 CTGACGTACC---CG---GCCTGTATGACGCATT-TTTC--GCCGATCAGGATGAGTTCG 3093 Query 42165 AAGAACTGTATACCAGC--CTTGAAAAAGACCCGACTG--TACGCAAGAAACGTATTAAA 42220 || || |||| |||| ||||||||| |||| | | ||||||||| || ||| Sbjct 3094 AA-CGCT-TATATCAGCAGTATGAAAAAGA--CGACAGCATCCGCAAGAAATCCATGAAA 3149 Query 42221 GCGGTAGATCTGTTCCAGTTGCTTGCACAGGAACGCGC 42258 ||||| ||||||||| | || | || |||||||| Sbjct 3150 GCGGTCGATCTGTTCTCGCTGATGATGCAAGAACGCGC 3187 Score = 132 bits (146), Expect = 5e-26 Identities = 361/539 (67%), Gaps = 24/539 (4%) Strand=Plus/Plus Query 43934 CTTTATCTGTGTATGCACGCTGTCAACGCTCTGGAAGCGATTCGTTTCTATGTCTCGTTT 43993 ||||||||||| || |||||||| |||||||| || ||||| |||||| || Sbjct 4919 CTTTATCTGTGCCTGATGAGCGTCAACGCGCTGGAAGCCATCCGTTTTTATGTCAGTTTC 4978 Query 43994 ACCTTTACGTTCAACTTTGCCGAACAGGGCAAGATGGAAGGTAACGCAAAGATCATGCGT 44053 ||| | ||| ||||||||||| | |||||| || ||||| || || || Sbjct 4979 GCCTGCTCATTCGCCTTTGCCGAACGCGAACTGATGGAGGGCAACGCCAAAATTATCAAA 5038 Query 44054 CTGATTGCCCGTGATGAAGCACTTCATCAGAAAGGTACTCAAAGCAAGATCCGACTCTG- 44112 ||||| ||||| |||||||| || || | || ||||| || ||| | || |||| Sbjct 5039 CTGATCGCCCGCGATGAAGCGCTGCACCTGACCGGTACCCA--GCATATGCTGAATCTGA 5096 Query 44113 -GCAGATGGGTAAAGATGACCCAGAAATGGCAGAAATCGCGTATCAGTACGAAGAAGAA- 44170 || || | || || || ||||||||| ||||||| | || | || | ||| Sbjct 5097 TGCGTTCCGGCCAGGACGATCCGGAAATGGCACAAATCGCCGAAGCGTGCCAACAGGAAT 5156 Query 44171 GCAACA--CAGATTTTCCTCGAAGTTTACGAGCAGGAAAAAGAATGGGCTGAACACTTAT 44228 || || | | || | || | | || ||||||| ||||| ||||| ||| || | | Sbjct 5157 GCTACGACCTGTTTGTGCTGGCTGC--AC-AGCAGGAGAAAGAGTGGGCGGAATACCTGT 5213 Query 44229 TCAGTATTGGT--GATGTTGACGGCGTGACACTGAAAAGTACAATC---GCCTATA--TC 44281 || | ||| |||| | ||| ||| || |||| ||| || ||| || | Sbjct 5214 TCCGCGACGGTTCGATGATT--GGCCTGA-AC---AAAG-ACATTCTCTGCCAGTACGTT 5266 Query 44282 GAACACTTAACCGACCAACGTATGCGAGCGGTTGGGTTACAGTCTCCGTTTAAACCGAGT 44341 ||| || | ||| | || |||| |||||| ||| | | | ||||| || || | Sbjct 5267 GAATACATCACCAATATCCGCATGCAAGCGGTAGGGCTGCCCTTGCCGTTCCAAACGCGC 5326 Query 44342 CCTAACCCGTATCCGTGGATGAACAAATGGTTGAAGTCTGACAACGTTCAGGTAGCCCCG 44401 |||||||| |||||||| || ||| || ||||||||||| ||||| || ||| Sbjct 5327 ACTAACCCGATCCCGTGGATTAATGCCTGGCTGGTCTCTGACAACGTGCAGGTTGCTCCG 5386 Query 44402 CAAGAGGTTGAAGTAAGTTCTTACCTGGTTGGCAACCTCAACACTGAGATCAGCGACGA 44460 ||||| || ||||| |||||||| ||||| ||| | | | ||||||||| || ||| Sbjct 5387 CAAGAAGTGGAAGTGAGTTCTTATCTGGTCGGCCAAATTGATTCTGAGATCAACGCCGA 5445 Score = 98.7 bits (108), Expect = 1e-15 Identities = 228/344 (66%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 43425 TATTTGAAAAGCTGACTGAAAAACAACTGTCATTCTTCTGGCGACCGGAAGAAGTGGATC 43484 |||| || ||||||| || ||||| || || || |||||||| || ||||| |||||| Sbjct 4446 TATTCGAGAAGCTGATAGAGAAACAGCTCTCCTTTTTCTGGCGTCCAGAAGAGGTGGATG 4505 Query 43485 TGTCGATTGACCGTATGCAGTATGCGAAAATGCCGGAACATGAAAAAATCATTTTCGATT 43544 |||| || || || | ||| | | || ||||||||||| ||| ||| Sbjct 4506 TGTCTCGCGATCGCATCGACTATCAGGCGCTACCAGAACATGAAAAGCACATCTTCATCA 4565 Query 43545 CTAACCTGCAATATCAAACCCTACTGGATACCATTCAGGGACGCGGCCCTAACCTTGCAT 43604 || ||| |||| ||||| || ||||| ||||||| |||||| |||| ||| | |||| Sbjct 4566 GCAATCTGAAATACCAAACACTGCTGGACTCCATTCAAGGACGCAGCCCGAACGTCGCAT 4625 Query 43605 TTCTCCCGATTGCCTCTGATGTATCAATGGAAACGTGGATCGAAACATGGGCGTTCAGTG 43664 | | ||| | ||| | ||||||| ||||| ||||| ||||| || | Sbjct 4626 TGTTACCGCTGATCTCCATCCCAGAGTTGGAAACCTGGATAGAAACCTGGGCATTTTCAG 4685 Query 43665 AAACAATTCACAGTCGCAGTTATACGCACATTCAGCGCAACCTGCATATCGATCCGGCTA 43724 |||| || || || ||||| || || ||||| | | ||||||||| Sbjct 4686 AAACCATCCATTCCCGTTCCTATACCCATATCATCCGCAATATTGTCAACGATCCGGCAC 4745 Query 43725 AAGAGTTCGACAAAATCCTTCGTAACGAAGCGATCATGAAACGT 43768 | |||||| | ||| || || |||| ||| |||||||| Sbjct 4746 TGGTGTTCGATGATATCGTTACCAATGAAGAGATTCTGAAACGT 4789 >seq2333 Length=8475 Score = 208 bits (230), Expect = 9e-49 Identities = 731/1121 (65%), Gaps = 58/1121 (5%) Strand=Plus/Minus Query 152270 CAACGAGAACGCGAACAAAGATGCAAGGGTATTCCCGACACAGCGCGATTTGCTGGCGGG 152329 |||||||||||| |||||||| | ||| |||| || |||||||| ||||||| || Sbjct 5627 CAACGAGAACGCCAACAAAGACAGTAAAGTAATCCCTACCCAGCGCGACCTGCTGGCCGG 5568 Query 152330 TATCGTAGCGAAGCATTTCGCCCGTAATCATATCCTCCCGAAACATATCGTAGAAGCGCA 152389 |||||| || ||||| | |||| | |||||||| ||| | | || || || Sbjct 5567 TATCGTTGCCAAGCACTACGCCAAGCAACATATCCTGCCGCGCGACGTGGTGCTTGCTCA 5508 Query 152390 TGATTCCGGTGACATCCACTATCACGATCTGGACTATAGCCCGTTCACCCCTTACACTAA 152449 ||| |||||| || ||||| |||||||||||||| ||||||| ||| || Sbjct 5507 TGAACGCGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCAA 5448 Query 152450 CTGCTGTCTGGTTGACCTGAAAGGTATGCTGGAGAACGGTTTTAAAATGGGTAACGCGGA 152509 ||| ||| | ||||| |||| ||| || || || || || |||||||||||||| Sbjct 5447 CTGTATGCTGATCGACCTTGAAGGCATGTTGACCAAGGGGTTCAAGATGGGTAACGCGGA 5388 Query 152510 CATTGAACCGCCTAAATCGATCGGTGTTGCTACCGCTCTCATGGCGCAGATCACCGCACA 152569 ||||| || || ||||| ||| || || || | | ||| || |||| ||| || Sbjct 5387 GATTGAGCCACCAAAATCCATCTCAACCGCGACAGCAGTGACGGCCCAAATCATCGCGCA 5328 Query 152570 GATTGCCTCTCACCAGTACGGCGGGACAACCTTT--GCGAACGTGGATAAAGTGCTGGCT 152627 | | || ||| |||||||| || ||| || || | | ||| || | ||||| Sbjct 5327 GGTGGCAAGCCACATCTACGGCGGCACCACCATTAACCGTA--TCGATGAAATTCTGGCA 5270 Query 152628 CCATACGTCGAAATGACATTCTTCAAA--CATCTGCACGATGCTGAACATTACGGTATCG 152685 || | |||| | | || ||| ||| || | | | |||||| | | || | | Sbjct 5269 CCGTTCGTC--ACCGCCAGCCTTAAAAAGCACCGGGAAACTGCTGATGAGT--GGCA-CA 5215 Query 152686 AACACTATAATGATTATGTGTATGCGATTGAAAAG-ACTGAAAAAGATGTG-TATGATGC 152743 | | ||| | | ||||| | || | || |||||||| ||| || || || Sbjct 5214 TTCCC---GATGCGGACGCCTATGC-ACTGTCTCGTACCGAAAAAGA-GTGCTACGACGC 5160 Query 152744 GTTCCAGTCCTATGAGTATGAAGTAAACACCCTACATACTGCCAACGGACAAACCCCGTT 152803 |||||||| || ||||||||||| || || || || ||||| || || || ||||| Sbjct 5159 CTTCCAGTCGCTGGAATATGAAGTAAATACGCTGCACACCGCCAATGGTCAGACACCGTT 5100 Query 152804 TGTTACCATCACTTTCGGTACTGGTACGAGCGATTATGAA---CGCATGATCCAGAAAGC 152860 ||| ||| | ||||||| || || | || ||| ||| |||| ||| || | Sbjct 5099 TGTCACCTTTGGTTTCGGTCTCGGCAC---CCGTTGGGAATCGCGCCTGATTCAGCAATC 5043 Query 152861 GATCCTGAAAAACCGTATTCGCGGCCTTGGTAAAGAGGGTATTACTCCGGTATTCCCGAA 152920 |||||| ||||| ||| ||| || || ||| | ||| || |||| ||||| || Sbjct 5042 CATCCTGCGCAACCGCATTGCCGGTCTGGGCAAAAACCGTAAAACCGCGGTGTTCCCCAA 4983 Query 152921 ACTGGTTATGTTC---ATGGAAAAAGGAATTAACCTTGATCCAGAGGATCAAAACTATGA 152977 ||||| ||||| || | || | || | | | | |||| |||||||| Sbjct 4982 ACTGG---TGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGA 4926 Query 152978 CATCAAACAACTTGCCCTGGAATGTGCTTCGAAACGCATGTACCCAGATATCATTAGCGC 153037 |||||| ||||| || ||||| || || || || |||||||| ||||| | | Sbjct 4925 CATCAAGCAACTGGCACTGGATTGCGCCAGCAAGCGGATGTACCCGGATAT-----TCTC 4871 Query 153038 ATCTAATAACCGCCGTATCACTGGTTCTAGCGTTCCTGTA--TCTCCTATGGGTTGTCGC 153095 | || | | | | | | |||| | | || | || | |||||||| || ||| Sbjct 4870 AATTACGATCAGGTGGTTAA--GGTTACCG-GCTCGTTTAAGACGCCTATGGGCTGCCGC 4814 Query 153096 AGTTTCCTTAGCGTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACGTAATAAC 153155 ||||||||| |||||| |||| || | || || | || | ||||| || || ||| Sbjct 4813 AGTTTCCTTGGCGTGT---ATGAGGAAGAGGGCAAGCAGATCCACGATGGTCGCAACAAC 4757 Query 153156 CTTGGTGTGGTGACAATCAACCTCCCGCGCATTGCGATCGAAGCTGAAGCACAGGAAGAT 153215 || || || | | ||||||| |||||||| ||| | ||||| ||| || | | Sbjct 4756 CTCGGGGTAATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAGCAGAA-CATA-----AC 4703 Query 153216 GAAGACGCACACGACGCATTCTGGCGCATCCTTGATGAACGTCTGGATCTGTGCTTTGAA 153275 ||||| || |||||| | | | ||| | |||||| | ||| || Sbjct 4702 GAAGA-GC--------GTTTCTGGAACCTGTTGGATAATCGTCTGCAACTGGCGAAAAAA 4652 Query 153276 GCCCTGATGACTCGTATCGAAAGCCTACGCGGTGTTAAAGCCAGTGTTGCGCCGATCCTG 153335 || ||||||| || ||||| | | || |||||| |||| || || |||||| Sbjct 4651 GCGTTGATGACGCGCATCGAGCGTTTGGAAAACGTCAAAGCCCGTGTCGCTCCAATCCTG 4592 Query 153336 TACACAGAAGGTGCTTTTGGTGTCCGACTGAAACCGGATGA 153376 || | ||||| || | |||||| || |||||| |||| || Sbjct 4591 TATATGGAAGGCGCCTGTGGTGTACGCCTGAAAGCGGACGA 4551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563770435599360