Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq2351 159 5e-34 seq2333 150 3e-31 >seq2351 Length=10305 Score = 159 bits (176), Expect = 5e-34 Identities = 284/408 (70%), Gaps = 20/408 (5%) Strand=Plus/Plus Query 63676 TTTCTTTACCAACCCCGATCATGGCAGGTGTTCGTACGCCAACTCGACAATTTAGCTCAT 63735 |||| || ||||| ||||||||| | || || ||||| ||||| || || || ||||| | Sbjct 2581 TTTCATTGCCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCT 2640 Query 63736 GTGTTAAAATCGAATCTGGCGACTCTCTGCATTCAGTCAACAAAGTAGCCGAAGCAATCA 63795 | || || || | |||||| ||| |||| | ||| || || ||| Sbjct 2641 GCGTGTTGATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCG 2700 Query 63796 TCAACTA--TATCAGTAAACGTGCTGGTATCGGTGTTAATGGCGGTGCTATTCGTGCTGA 63853 | || || | ||| | ||||| |||||||| |||| | |||| ||||||||| Sbjct 2701 TGAAATACGTTTCAC--AGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGC--- 2755 Query 63854 AGGCTCGGTTG-----TTCGAGCAGGTGAA--ATTCGACACACTGG-TGTAATCCCATTC 63905 ||| ||| | |||| | |||||| |||| || ||||| |||| ||| ||| Sbjct 2756 --GCTGGGTAGCCCGATTCGCGGTGGTGAAGCATTC--CATACTGGCTGTATTCCT-TTC 2810 Query 63906 TGGAAACACTTTCAGACTGCTGTGAAGTCATGTTCACAAGGTGGTGTTCGTGGTGGTGCT 63965 | ||||| || ||||| || ||||| || || ||||| || ||||| || || || || Sbjct 2811 TATAAACATTTCCAGACCGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCG 2870 Query 63966 GCAACGCTAACTTACCCGATTTGGCATTTAGAAGTTGAAAAACTTTTGGTGCTGAAGAAC 64025 |||||| | ||||||| | |||||| | ||||| |||| || |||||||||||||| Sbjct 2871 GCAACGTTGTTTTACCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAAC 2930 Query 64026 AACAAAGGCGTTGAAGAAAACCGTATTCGTCATCTTGACTACAGTGTG 64073 ||| ||||| |||| ||||| | ||||| || || ||| | ||| Sbjct 2931 AACCGTGGCGTGGAAGGCAACCGCGTGCGTCACCTCGATTACGGCGTG 2978 >seq2333 Length=8475 Score = 150 bits (166), Expect = 3e-31 Identities = 1018/1621 (63%), Gaps = 59/1621 (4%) Strand=Plus/Minus Query 171958 AAAGAAAACGCGAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCAGGT 172017 || || ||||| || |||||| ||||| |||||||| ||| ||| || | || ||| Sbjct 5626 AACGAGAACGCCAACAAAGACAGTAAAGTAATCCCTACCCAGCGCGACCTGCTGGCCGGT 5567 Query 172018 ACAGTTGCGAAACAATACGCACTCGAAGACTTTCTACCGAAGCACATTGCAGAAGCACAT 172077 | ||||| || || ||||| || | | || ||| || | | || ||| Sbjct 5566 ATCGTTGCCAAGCACTACGCCAAGCAACATATCCTGCCGCGCGACGTGGTGCTTGCTCAT 5507 Query 172078 ATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCAATTCAAC 172137 | | || || ||||| | || ||| | || ||| || || || ||| |||||| Sbjct 5506 GAACGCGGTGAAATTCACTACCACGATCTGGACTACTCCCCGTTCTTCCCGATGTTCAAC 5447 Query 172138 TGTATGCTTATTGATATCAAAGGCATGCTTGAA-AACGGATTTAAAATGGGTAATGCTGA 172196 |||||||| || || | |||||||| |||| || || || || |||||||| || || Sbjct 5446 TGTATGCTGATCGACCTTGAAGGCATG-TTGACCAAGGGGTTCAAGATGGGTAACGCGGA 5388 Query 172197 GATCGAAGAGCCAAACAGTATCGCGACTGCTGCGACTATTGTCA-CTCAGATCATACAAC 172255 ||| || ||||| ||| | || || | | | || | | || ||||| | Sbjct 5387 GATTGAGCCACCAAAATCCATCTCAACCGCGACAGC-AGTGACGGCCCAAATCATCGCGC 5329 Query 172256 AAGTAAGTAGTCACATTTACGGCGGCAACACTGTTAATAGAATTGACGAAGTTCTAGCAC 172315 | || || ||||| |||||||||| ||| |||| | || || ||| |||| |||| Sbjct 5328 AGGTGGCAAGCCACATCTACGGCGGCACCACCATTAACCGTATCGATGAAATTCTGGCAC 5269 Query 172316 CATATGTTCGTAA--GTC-GTATTACAAATGGCTTG-AGGTTGGTCGCGAAGAGCA---T 172368 | |||||| | | | | ||| ||| | | | || | || ||| | Sbjct 5268 C----GTTCGTCACCGCCAGCCTTAAAAAGCACCGGGAAACTGCTGATGAGTGGCACATT 5213 Query 172369 CCCGATTCAGACTCAAAAGCAGCTATCTTTGCACGTAAACGTGTCGAGAAAGAAACGTAC 172428 |||||| | ||| | | ||| || ||| ||| ||| ||||| ||| Sbjct 5212 CCCGATGCGGACGCCTATGCA-CTGTCT-----------CGTACCGAAAAAGAGTGCTAC 5165 Query 172429 GACGCTTTTCAAACGTTTGAGTATCAAGTTAACACAATGCAGACTTCGAACGGTCAGACG 172488 ||||| || || || | || ||| |||| || || |||| || | || |||||||| Sbjct 5164 GACGCCTTCCAGTCGCTGGAATATGAAGTAAATACGCTGCACACCGCCAATGGTCAGACA 5105 Query 172489 CCATTCACGACGATTAACTTCGGTCTAGGTACATCGTGGGAAGAAAAGCTTATTCAGAAA 172548 || || || || |||||||| || || |||||| || |||||| || Sbjct 5104 CCGTTTGTCACCTTTGGTTTCGGTCTCGGCACCCGTTGGGAATCGCGCCTGATTCAGCAA 5045 Query 172549 TGCATTCTGCAAAATCGAATTGCTGGTCTAGGCAAGACAAAGAAAACAGCGATTTTCCCG 172608 | ||| |||| || || ||||| ||||| ||||| | ||||| ||| | ||||| Sbjct 5044 TCCATCCTGCGCAACCGCATTGCCGGTCTGGGCAAAAACCGTAAAACCGCGGTGTTCCCC 4985 Query 172609 AAACTTGTATTCACTATCAAAGATGGTGTGAACTTGAAAGAAGGCGATCCGTGTTACGGC 172668 ||||| || ||| ||||| || ||||| || || | | ||||||| || | | Sbjct 4984 AAACTGGTGTTCGCTATCCGCGACGGTGTCAATCACAAGGCTGCCGATCCGAACTATGAC 4925 Query 172669 ATTAAGAAGCTTGCACTTGAATGCGCAAGTAAGCGCATGTATCCAGATATCTTGAGCTAT 172728 || ||| | || ||||| || ||||| || ||||| ||||| || ||||| | | || Sbjct 4924 ATCAAGCAACTGGCACTGGATTGCGCCAGCAAGCGGATGTACCCGGATATTCTCAATTAC 4865 Query 172729 GAAAAGCTAGTAGAAACAACTGGCGGGTTTAAGTCACCGATGGGATGTCGTTCATTCTTA 172788 || || | || | || ||| ||||||| | || ||||| || || ||| | Sbjct 4864 GATCAGGTGGTTAAGGTTACCGGCTCGTTTAAGACGCCTATGGGCTGCCGCAGTTTCCTT 4805 Query 172789 GGCGACTGGAAAAACGAAGATGGTGAAACTG-TATTCGACGGTCGAAACAATCTAGGCGT 172847 |||| | | | ||||| || || | | | ||| ||||| ||||| || || || Sbjct 4804 GGCGTGT---ATGAGGAAGAGGGC-AAGCAGATCCACGATGGTCGCAACAACCTCGGGGT 4749 Query 172848 TGTCTCGTTGAACATTCCCCGAATTGCAATTGAAGCATCTGGTGATACTGCA---CGATT 172904 || | ||| | || || || || | |||||| | ||| | | || || Sbjct 4748 AATCAGCCTCAACCTGCCGCGCATCGCGCTGGAAGCA---GAACATAACGAAGAGCGTTT 4692 Query 172905 CTTTGAAATTCTTC-ATGATCGT-TGCACACTCGCGTACGAAGCGTTGATGCTACGTATT 172962 || ||| | || || ||||| |||| ||| ||| | ||||||||||| || || Sbjct 4691 CTG-GAACCTGTTGGATAATCGTCTGCA-ACTGGCGAAAAAAGCGTTGATGACGCGCATC 4634 Query 172963 AAACGCTTTGATGATGTGACTGCATCAGTTGCACCGATTCTGTACTGTGAAGGTGCAATG 173022 | || || || | || | || || || || || ||||| ||||| || Sbjct 4633 GAGCGTTTGGAAAACGTCAAAGCCCGTGTCGCTCCAATCCTGTATATGGAAGGCGCCTGT 4574 Query 173023 GGTGTACGTTTGAAACCAACTGATAAAGTCAGTGAAGTGTTCAAGCATGGTCGCTCAAGT 173082 |||||||| ||||| | || || || ||| | ||||| | ||||| || Sbjct 4573 GGTGTACGCCTGAAAGCGGACGACAACGTTGCTGAGATCTTCAAAAACGGTCGGGCATCG 4514 Query 173083 ATCTCACTTGGTTACATCGGCTTACACGAGGC-AGTAACACTTCTGTCGCCTGATAAAGA 173141 |||||| | || || || || | || ||| | | |||| | ||| | | Sbjct 4513 ATCTCATTGGGCTATATTGGGGTTCATGAGACCATTAACGCG--------CTGTTT--GG 4464 Query 173142 CATGCATACATTCGAGTCACAGCATAAGCAATTCCTTGCTGAGAAG------ATTGTAGA 173195 || || ||| || || | || ||||| | | || || | || || | Sbjct 4463 CAACCAGACACACGTGTTCGATAATGAGCAACTGCGTGAAAAGGCGGTCGCCATCGTCGC 4404 Query 173196 AACGCTTAGAGCGTATACTGACGCATGGAAAGAACTGACTGGTTACGGATTTAGTCTGTA 173255 | || | ||| || || ||||||||| || || ||||| || || || || Sbjct 4403 ACGCCTGAAAGCCGCGACCGATCAGTGGAAAGAAGAAACCGGCTACGGTTTCAGCCTTTA 4344 Query 173256 CAGCACACCAAGCGAATCGCTATGTGATCGTTTCTGTCGTCTTGATCAAGAGAAGTACGG 173315 ||| || || || ||| || ||||| ||||| || ||| | || | | | ||| Sbjct 4343 CAGTACGCCGAGTGAAAACCTGTGTGACCGTTTTTGCCGTATCGACACCGCTGAATTCGG 4284 Query 173316 TATCATTACTGGTATCAATGACAAAGACTACTATACAAACTCGTTCCACTTAGACGTATT 173375 | | | || | | || |||| ||||| || ||| |||||||| ||||| Sbjct 4283 CGTGGTACCAGGCGTGACCGATAAAGGTTACTACACCAACAGCTTCCACTTGGACGTGGA 4224 Query 173376 CAAGAAAGTGAATCCGTTCGAGAAGATTGACTTTGAAGCATCGTACCCAGCATATGCAAA 173435 ||||| |||||||| | | |||| || ||||||||| | |||||| | ||||| Sbjct 4223 GAAGAAGGTGAATCCTTACCAGAAAATCGACTTTGAACTGCCCTACCCACCGCTGGCAAA 4164 Query 173436 CGGCGGTTTCATTTGCTATGCAGAGTTCCCGAACATGCGCGACAATATCAAAGGTCTAGA 173495 ||| || ||||||||||| | |||| |||||| ||| | || | |||| || || Sbjct 4163 CGGAGGCTTCATTTGCTACGGCGAGTATCCGAACCTGCAACATAACCTTAAAGCGCTGGA 4104 Query 173496 ACGTGTATGGGATTATGCTCATAGCAAAGTTGCTTACTTCGGTACAAACACACCGATTGA 173555 | || |||||||| | ||||| || | || | ||| || || || ||||| || Sbjct 4103 AGACGTCTGGGATTACAGTTATAGCCGTGTGCCCTATTACGGCACCAATACGCCGATCGA 4044 Query 173556 T 173556 | Sbjct 4043 T 4043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 791867921402880