Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_021534.1 Length=47552 Score E Sequences producing significant alignments: (Bits) Value seq3282 163 9e-36 seq2452 89.7 2e-13 >seq3282 Length=7904 Score = 163 bits (180), Expect = 9e-36 Identities = 203/273 (74%), Gaps = 4/273 (1%) Strand=Plus/Plus Query 33176 GAGGAATCAACAAAGTAATCATTTTGGGCACTCTCGGACAAGACCCGGAAGTTAAATATA 33235 |||| | || ||||| || || | || | ||| || |||||||||||||| ||| Sbjct 7265 GAGGCGTTAATAAAGTGATTCTTGTCGGGAATCTGGGGCAAGACCCGGAAGTCCGTTATC 7324 Query 33236 TGCCTTCTGGCGGCGCTGTGTGC-AATCTGTCTCTGGCAACATCAGAGCAGTGGAACGAT 33294 |||| || || || || ||| || ||| ||||||| || ||||| ||| ||| Sbjct 7325 TGCCGAACGGTGGTGCCGT-TGCTAACCTGACTCTGGCCACGTCAGATACCTGGCGCGA- 7382 Query 33295 AAAGCA-ACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAA 33353 ||||| || || || ||||||||| ||||||||||| ||||| | | |||||| Sbjct 7383 CAAGCAGACCGGTGAGCAGAAAGAGCGCACAGAATGGCACCGCGTCACGCTGTACGGAAA 7442 Query 33354 GCTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAA 33413 |||||| || |||||||| |||||||||||||||||||| ||||||||||| ||||| | Sbjct 7443 GCTGGCTGAAGTGGCTGGAGAATACCTGCGCAAAGGCTCACAGGTGTATGTTGAAGGTCA 7502 Query 33414 ATTACGTACTCGCAAATGGACAGATCAAAGCGG 33446 | | || || || |||||| ||||| ||||| Sbjct 7503 ACTGCGCACGCGTAAATGGCAGGATCAGAGCGG 7535 >seq2452 Length=2364 Score = 89.7 bits (98), Expect = 2e-13 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 33296 AAGCA-ACAGGGGAAAAGAAAGAGCAGACAGAATGGCATCGCGTGGTTATCTTCGGAAAG 33354 ||||| || || || |||| |||| || |||||||||||||| | | ||||||| Sbjct 1986 AAGCAGACTGGAGAGCAGAAGGAGCGCACGGAATGGCATCGCGTCACGCTGTACGGAAAG 2045 Query 33355 CTGGCAGAGGTGGCTGGCGAATACCTGCGCAAAGGCTCTCAGGTGTATGTAGAAGGAAAA 33414 |||||||||||||||| ||||| || ||||| || || ||||| ||| | || || || Sbjct 2046 TTGGCAGAGGTGGCTGGTGAATATCTACGCAAGGGTTCGCAGGTATATATCGAGGGCCAA 2105 Query 33415 TTACGTACTCGCAAATGGACAGATCA 33440 || || || | || ||| ||| || Sbjct 2106 TTGCGCACAAGGAAGTGGCAAGACCA 2131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152037635649024