Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq696 122 1e-21 seq141 102 1e-15 >seq696 Length=528002 Score = 122 bits (134), Expect = 1e-21 Identities = 106/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Minus Query 1592165 ACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTT 1592224 || ||||| ||| |||| ||| | |||||||||||||||||||| ||| ||||| | Sbjct 106261 ACACTCTTCGAGCTGATTCTCTCAGCCAACTACCTCGACATCAAAGGTCTCCTCGACGTC 106202 Query 1592225 GGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACC 1592284 |||||| | || ||||||||||||||||||||| | || ||||| || |||||||| Sbjct 106201 ACCTGCAAGACAGTCGCCAACATGATCAAGGGCAAGACCCCAGAGGAAATTCGCAAGACA 106142 Query 1592285 TTTAACATCAAG 1592296 || ||||||||| Sbjct 106141 TTCAACATCAAG 106130 >seq141 Length=1333187 Score = 102 bits (112), Expect = 1e-15 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 1254368 CAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTGTTGCGCTTGTTCGAGTGCGC 1254427 |||||||||||| ||||| ||||| | || | ||| |||| |||||||| |||| | Sbjct 705236 CAGGCGCACGGCTGTCTGAATCTCCCTCGAGGTGATGGTGTGTCGCTTGTTGTAGTGGAC 705177 Query 1254428 CAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGAC 1254487 ||||| || ||||||| |||| | |||| |||||||| || || ||||||| Sbjct 705176 GAGACGAGAGGACTCGGTGGCGATCCTCTCGAAGATGTCGTTCACGAAGCTATTCATGAT 705117 Query 1254488 CGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTAGAT 1254547 ||||| ||| ||| | || | ||| || || |||||| ||| |||||| |||| Sbjct 705116 GCTCATCGCCTTCGAGGACACACCGATGTCCGGCTGGACCTGCCGGAGGACCTTGAAGAT 705057 Query 1254548 GAACGACGAGTACG 1254561 | | | ||||||| Sbjct 705056 GTAGGTGGAGTACG 705043 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106813567337856