Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq232 170 2e-37 seq14 91.5 1e-13 >seq232 Length=1000471 Score = 170 bits (188), Expect = 2e-37 Identities = 266/378 (70%), Gaps = 2/378 (1%) Strand=Plus/Minus Query 34255 CCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTT-TTAGCGGACACGAT 34313 ||||||| || || || ||||| ||||| |||| | | |||| ||||| || | Sbjct 835072 CCGTGATGTCCACAAGCCTTGCATCCCTGGGAGATGGT-TCCTTTCTTAGCACTAACCAA 835014 Query 34314 GAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATC 34373 || ||||||||||| || ||||| | ||||||| |||| |||| | || |||||||| Sbjct 835013 CAGTTCAGTCTCCGGATTATCACAAGCTGGACACAGCACATACTTCCTTATAAAACCATC 834954 Query 34374 AAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTT 34433 | || ||||| | ||| | || || ||||||||||| ||||| ||||| || || Sbjct 834953 CAACAAATCCTGGAGTTTAGTTGCTTCATGCGAGCCGTTGACAATGAAACGTTCATTCTT 834894 Query 34434 GTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGC 34493 ||| | |||||||| ||||||| || || || || | |||||||| || | || Sbjct 834893 AAAATTAAATTGCGTTTGTGCGCCCAATTCACATCCAAAAAATTTTGTCGGATATGTCGC 834834 Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 || | |||| ||||| || | || ||||||||| || || || || || || || Sbjct 834833 AGGCCTGCCAATAGCCTTTGCCACGTCCACCATGTTGACTATAACTGTTTTAATACCATT 834774 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 || || || || || || || |||||| ||||| || ||||| ||||| || || Sbjct 834773 TCCTTTGCCCTCAACTTTAGCCTGGATGCGAGGCATCTTATAGCGATAGAATGCATCGCT 834714 Query 34614 CACATTGCGGTTAACGTT 34631 ||| ||||| || || || Sbjct 834713 CACGTTGCGATTCACATT 834696 >seq14 Length=2234412 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || || || ||||| |||| || || ||||| ||| |||| |||| || Sbjct 1933395 AACATGCAGATCTTCGTAAAAACCCTAACTGGGAAGACCATCACCCTCGAGGTGGAGGCT 1933454 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 || || ||| | || ||| || ||| ||||| || ||| | ||| || Sbjct 1933455 TCTGACACAATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGCATTCCCCCAGAC 1933514 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || || || || |||| || ||||||||||| ||||||| | || || | |||||| Sbjct 1933515 CAGCAGAGGCTGATTTTCGCTGGTAAACAGCTCGAGGATGGACGCACCCTGTCTGATTAC 1933574 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || ||||| || | ||| |||| | ||| | || || || Sbjct 1933575 AACATTCAGAAGGAATCGACACTTCACTTGGTACTCAGATTACGTGGTGG 1933624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412821634980224