Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_022343.1 Length=159991 Score E Sequences producing significant alignments: (Bits) Value seq2351 145 8e-30 seq3764 91.5 2e-13 >seq2351 Length=10305 Score = 145 bits (160), Expect = 8e-30 Identities = 292/429 (68%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 15053 CCGACCCCCATCATGGCAGGCGTTCGTACTCCTACCCGTCAGTTCAGTTCATGCGTTCTG 15112 || || || |||||| | ||||| ||||| || |||||||||||||| || ||||| || Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 15113 ATCAAAACTGGCGACACGCTGGATTCCATCAACGCAACCGCCAAATCTATCGTAGACTAT 15172 || | ||||||| ||||||||||| ||||| ||| ||| ||||||| | || Sbjct 2649 ATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATAC 2708 Query 15173 GTGAGCAAGCGTGCTGGCATCGGATTTGACGTTGGTGCAATTCGCGGTATCGGCAGTCCT 15232 || ||||||| || ||||| || ||| ||| ||||| | | || || || Sbjct 2709 GTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCG 2768 Query 15233 ATCCGGGGCGGAGAGATGGTCCACACTGGTCTG-GTTCCATTCATCAAATAT---CTGAC 15288 || || || || || |||| ||||| ||| |||| ||| ||| || | ||| Sbjct 2769 ATTCGCGGTGGTGAAGCATTCCATACTGG-CTGTATTCCTTTCTATAAACATTTCCAGAC 2827 Query 15289 CGGGGCACTGAAGTCGTGCTCTCAGGGCGGTATTCGCGGTGGTGCTGCTACAGCTTATAT 15348 | ||| |||| || ||||| ||||||||| | ||||| || || || || | | Sbjct 2828 C---GCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTA 2884 Query 15349 CCCGCTGTGGCATTACCAGTTCGACGATGTCGTTGTGTTGAAGAACAACCGTGGTACGGA 15408 ||||||||||||| | | || | | ||| |||||||||||||||| ||| Sbjct 2885 CCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGA 2944 Query 15409 AGAAAACCGCGAGCGCCGTATCGACTATGGTATTCAGATCAACCGCGTCATGTTTGAACG 15468 || ||||||| ||| | |||| || || | ||| | ||| | |||| | | || Sbjct 2945 AGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCG 3004 Query 15469 TCTGGTCAA 15477 |||||||| Sbjct 3005 CCTGGTCAA 3013 >seq3764 Length=2321 Score = 91.5 bits (100), Expect = 2e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 85014 ATATGGTGATCCTGATTGGTTTTGAACCAATGACCAATCGATTATGAGTCGACTGCTCTA 85073 |||||||| || |||| |||||||||| |||||| ||||||||||||| |||||||| Sbjct 2120 ATATGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTCTA 2179 Query 85074 ACCACTGAGCTACAGGACCA 85093 |||||||||||| || ||| Sbjct 2180 ACCACTGAGCTAAGGGGCCA 2199 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511817812577280