Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_022772.1 Length=156338 Score E Sequences producing significant alignments: (Bits) Value seq2351 109 5e-19 >seq2351 Length=10305 Score = 109 bits (120), Expect = 5e-19 Identities = 252/370 (68%), Gaps = 10/370 (3%) Strand=Plus/Plus Query 104948 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 105007 ||||| || |||||||||||||| |||||||||||||| || ||||| || || || | Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 105008 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTAT 105067 || | ||| |||| |||| || || || || || ||| ||| || | || Sbjct 2649 ATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATAC 2708 Query 105068 GTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGCCCT 105127 || || | || || || ||||| || | | ||| ||||||| | |||||||| Sbjct 2709 GTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCG 2768 Query 105128 ATCCGAAAAGGTGAAATGGTGCACACAGGTCTG-GTTCCTTTC-ATAAA-ATAT-CTGAC 105183 || || |||||| | || || || ||| |||||||| ||||| || | | ||| Sbjct 2769 ATTCGCGGTGGTGAAGCATTCCATACTGG-CTGTATTCCTTTCTATAAACATTTCCAGAC 2827 Query 105184 TGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCTATA 105242 ||| | || || ||||| || |||||| | || |||||| | ||||| ||| | || Sbjct 2828 ---CGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTA 2884 Query 105243 TCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTTG 105302 ||| | |||||| || | || | |||| ||||||||||||||||| | | Sbjct 2885 -CCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGG 2943 Query 105303 AAGAGAACCG 105312 ||| ||||| Sbjct 2944 AAGGCAACCG 2953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500128792381440