Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_022968.1 Length=148567 Score E Sequences producing significant alignments: (Bits) Value seq2955 342 5e-89 >seq2955 Length=1537 Score = 342 bits (378), Expect = 5e-89 Identities = 471/659 (71%), Gaps = 0/659 (0%) Strand=Plus/Minus Query 80773 ATTTTTGCTGGCCTGATCGCTCTGGGTGCCGTTGGCCTGACTGGTTGTGAACGTGCAACT 80832 |||||||||| | | || | || || | || ||||||||||| ||||| || || Sbjct 1269 ATTTTTGCTGCCGTCCTCACCGTGTCGGCGCTGGGGCTGACTGGTTGCGAACGCGCCACC 1210 Query 80833 GTCCCGGCAGGTTATGTGGGTGTGAAGGTTGACCTGTATGGCGACGAAAAGGGTGTTCAG 80892 || || || || ||||| ||||| || || || || || || |||||||| || || ||| Sbjct 1209 GTGCCCGCGGGGTATGTTGGTGTAAAAGTAGATCTCTACGGTGACGAAAAAGGCGTCCAG 1150 Query 80893 CAGCAGGAAGTGGGTGTTGGTAAATACTGGCTGACCTGGAACGAAGAAATCTATCAGTTC 80952 |||||||||||||| || |||||||||||| | |||||||||||||| || || ||||| Sbjct 1149 CAGCAGGAAGTGGGCGTGGGTAAATACTGGTTAACCTGGAACGAAGACATTTACCAGTTT 1090 Query 80953 CCTACATTCAACCAGTTAAACAACTACGACCAACCGTTTAACTTCCAGACCAAGGATTCT 81012 || || ||||||||| || ||||||||||| | || || | |||||||| || || Sbjct 1089 CCAACGTTCAACCAGCTACACAACTACGACAAGCCATTCACTTTCCAGACTGCTGACTCA 1030 Query 81013 ATGACGGTCTCTGCGAAGGTTGGTGTTGAGTATTACGTTGACCGCTCCAAGGTCACCAAG 81072 ||| || || | | || || || |||||||| || | ||||| ||||| Sbjct 1029 ATGGATGTGAAAGCCCGGATCGGCGTCGAATATTACGTCGATCCGGAGAAGGTGACCAAA 970 Query 81073 ATCTTCCAGACCTACCGTAAAGGTGTTCAGGAAATCACTGATGTCAACATTCGTCAGAAC 81132 || || ||||||||||| || || || | |||||||| || |||||| | || |||||| Sbjct 969 ATATTTCAGACCTACCGCAAGGGGGTGGACGAAATCACCGAGGTCAACTTGCGCCAGAAC 910 Query 81133 ATCTCTGATGCACTGATCAAAGAAGCGGGTACGATGGATATCGGTACGCTGGCTGGCGAT 81192 ||| || || |||||||| | | || | |||||||||| |||| || | | Sbjct 909 ATCAGCGACGCGCTGATCAACCACTCTGGAAAGATGGATATCAACTCGCTCGCCGCAGGC 850 Query 81193 GGTAAATCTCAGCTTCTGGATCGTGTGACGAAGACCCTGAAAGCGAAGCTTGACCCGATT 81252 |||||| | ||| | ||||| | || || || | ||||| | ||||| ||||| || Sbjct 849 GGTAAAACGCAGTTACTGGAGCTGGTCACACAGGACTTGAAATCCAAGCTCGACCCTATC 790 Query 81253 GGTATCGTGATCGTGAAACTGTCTTACACTGATGATCTGCGTTATCCACCACAGGTAACC 81312 || ||| ||| || || ||||| | || ||| || || | | |||||| Sbjct 789 GGCATCAGGATTGTAAAGCTGTCATGGGTCAGCGACCTGGACTACCCGCAAAAGGTAAAA 730 Query 81313 GCATCCATCAACGCGAAGATCGAAGCGACTCAGAAAGCGCTGCTGCGTGAAAACGAAATC 81372 | |||||||||||||| |||||||| || ||| || | |||||||||| |||||| Sbjct 729 GAGTCCATCAACGCGAAAATCGAAGCCACCCAGCGCGCCTTATTGCGTGAAAATGAAATC 670 Query 81373 CAGCAGACCAAAGCTGAAGCTCAGAAACAGATCGAAGCCGCTCGCGGTGAAGCTGAATC 81431 ||| ||||||||||||| || ||| |||||| ||||| || ||||| || || Sbjct 669 GCGCAATCCAAAGCTGAAGCACAAAAAGCCATCGAACAGGCTCGTGGAGAAGCGGAGTC 611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475262825794560