Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 1e-13 seq10 87.8 1e-12 >seq14 Length=2234412 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||| || || || ||||| |||| || || ||||| ||| |||| ||||||| Sbjct 1933395 AACATGCAGATCTTCGTAAAAACCCTAACTGGGAAGACCATCACCCTCGAGGTGGAGGCT 1933454 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || ||| | || ||| || ||| || || || ||| | ||| || Sbjct 1933455 TCTGACACAATCGAGAATGTCAAAGCCAAAATTCAGGACAAGGAGGGCATTCCCCCAGAC 1933514 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 |||||||| || |||| || ||||||||||| ||||| | || || | || ||| Sbjct 1933515 CAGCAGAGGCTGATTTTCGCTGGTAAACAGCTCGAGGATGGACGCACCCTGTCTGATTAC 1933574 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||||||| ||||| || || | ||| |||| | ||||| || || || Sbjct 1933575 AACATTCAGAAGGAATCGACACTTCACTTGGTACTCAGATTACGTGGTGG 1933624 >seq10 Length=2352850 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGG 107614 |||||| |||||||| || || || || ||||||||||| ||| | ||| || || Sbjct 819890 AATGCAGATTTTTGTTAAGACATTGACTGGCAAAACCATCACCCTGGAAGTCGAAGCATC 819949 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 || ||| | | | || ||| || ||| ||||||||||| | || ||||| Sbjct 819950 TGACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCA 820009 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 ||| | | || | || |||||||| ||||||||| | ||| | | |||||||| Sbjct 820010 ACAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGACGGAAGAACTCTTTCAGACTACAA 820069 Query 107735 CATTCAAAAGGAGTCTAC 107752 ||||||||| ||||| || Sbjct 820070 CATTCAAAAAGAGTCCAC 820087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398857510317952