Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq10 147 2e-30 seq676 109 4e-19 >seq10 Length=2352850 Score = 147 bits (162), Expect = 2e-30 Identities = 172/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | ||| || || | ||| || ||||| |||||||||||||| || || | Sbjct 820118 TCCTCCTCGAAGACGAAGAACGAGATGGAGGGTGGACTCTTTTTGAATGTTGTAGTCTGA 820059 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 || || | || || | |||||| ||||| | ||||| | || ||||| || || Sbjct 820058 AAGAGTTCTTCCGTCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGTGG 819999 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||||| ||||| ||||| |||||| | ||| ||| |||| | ||||||||| ||| | Sbjct 819998 GATACCTTCTTTATCTTG-AATTTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCGA 819940 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| || || || ||||||||||| || || |||||||| ||||||||| Sbjct 819939 CTTCCAGGGTGATGGTTTTGCCAGTCAATGTCTTAACAAAAATCTGCATT 819890 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | ||||| ||||| ||||| ||||| |||||||| | || ||| | Sbjct 818966 ACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCC 818907 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | |||| | |||||| || || || || |||||||| Sbjct 818906 ATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTT 818847 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||||| |||| | ||||||||| || || || | || || Sbjct 818846 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAAGCCTCAACCTCCAACGTAAT 818787 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || |||||||| |||||||| || || |||||||| Sbjct 818786 GGTCTTGCCAGTCAAGGTTTTCACGAAGATCTGCAT 818751 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | ||||| ||||| ||||| ||||| |||||||| | || ||| | Sbjct 819194 ACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCC 819135 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | ||||| | |||||| || || || || |||||||| Sbjct 819134 ATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTT 819075 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||||| |||| | |||||||| || || || || || || Sbjct 819074 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGAT 819015 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || || || |||||||| Sbjct 819014 GGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 818979 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | ||||| ||||| ||||| ||||| |||||||| | || ||| | Sbjct 819422 ACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCC 819363 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | ||||| | |||||| || || || || |||||||| Sbjct 819362 ATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTT 819303 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||||| |||| | |||||||| || || || || || || Sbjct 819302 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGAT 819243 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || || || |||||||| Sbjct 819242 GGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819207 Score = 123 bits (136), Expect = 2e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | ||| || || | ||| || ||||| ||||| || || || ||||| | Sbjct 821030 TCCTCCTCGAAGACGAAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGA 820971 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || | |||||| ||||| | ||||| | ||||| || || || Sbjct 820970 GAGTGTTCTCCCATCCTCCAATTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 820911 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| ||||||||||| || | || ||||||| |||| | ||||||||| ||||| Sbjct 820910 AATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATAGTGTCAGAGGCCTCTAC 820851 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || || || ||||| || || || ||||| |||||||| Sbjct 820850 TTCCAGTGTGATGGTCTTCCCAGTCAATGTCTTTACAAAGATCTGCAT 820803 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| || | ||||| ||||| ||||| ||||| |||||||| | || ||| | Sbjct 819650 ACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCC 819591 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| ||||| || || ||||| | |||| | |||||| || || || || |||||||| Sbjct 819590 ATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTT 819531 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||||| |||| | |||||||| || || || || || || Sbjct 819530 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGAT 819471 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || || || |||||||| Sbjct 819470 GGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819435 Score = 111 bits (122), Expect = 1e-19 Identities = 154/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || || |||||||| ||||||||||| || || | | ||| || Sbjct 819878 ACGTAGGACCAAGTGCAGAGTGGATTCCTTTTGAATGTTGTAGTCTGAGAGGGTTCGGCC 819819 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || | || || ||||| | |||| | |||||| || || || || |||||||| Sbjct 819818 ATCTTCCAACTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTT 819759 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || ||||||| |||| | |||||||| || || || || || || Sbjct 819758 GTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGAT 819699 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || ||||| || || || || || |||||||| Sbjct 819698 GGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819663 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 |||||| | | ||| || || | ||| || ||||| ||||| || || || ||||| | Sbjct 820574 TCCTCCTCGAAGACGAAGAACAAGATGGAGAGTGGACTCTTTCTGGATATTGTAATCAGA 820515 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | || | ||| || | ||||| ||||| | ||||| | ||||| || || || Sbjct 820514 GAGTGTTCTCCCATCCTCCAACTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGG 820455 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| ||||| || || || | || |||||| |||| | |||||||| ||| || Sbjct 820454 AATGCCCTCCTTATCCTGGATCTTGGCCTTGACATTTTCGATGGTGTCAGAGGCTTCGAC 820395 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 ||| || || || || || || || | ||| || || |||||||||||| Sbjct 820394 TTCTAGGGTGATCGTCTTTCCCGTGAGGGTCTTCACGAATATCTGCATT 820346 >seq676 Length=265522 Score = 109 bits (120), Expect = 4e-19 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 29572 CGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAA 29631 || || ||||| ||||| || ||||| || || ||||| ||||| | || |||||| Sbjct 178340 CGAAGGACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCG 178399 Query 29632 TCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTG 29691 || || | |||||| ||||| | |||| ||| ||||| || || ||||| ||||| || Sbjct 178400 TCTTCCAATTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCCTCCTTA 178459 Query 29692 TCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATA 29751 || || | ||| || || | || | || ||||| || || || || || || Sbjct 178460 TCCTGGATCTTTGCCTTCACGTTCTCGATGGTATCAGAGGCCTCGACCTCGAGGGTGATG 178519 Query 29752 GTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || ||||| || | ||||| || |||||||||||||| Sbjct 178520 GTCTTGCCCGTCAGCGTTTTCACGAATATCTGCATTTT 178557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385200570799488