Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_023557.1 Length=271084 Score E Sequences producing significant alignments: (Bits) Value seq2351 654 0.0 seq2689 95.1 2e-14 >seq2351 Length=10305 Score = 654 bits (724), Expect = 0.0 Identities = 818/1117 (73%), Gaps = 21/1117 (2%) Strand=Plus/Plus Query 71289 TAAAAACGATCAGATGGCTGAACCGATGTTCCTGGGTCAGTCGGTTAACGTCTCACGTTA 71348 ||||||||||||| | |||||||||||| | |||||||| |||||||| | ||||| Sbjct 4366 TAAAAACGATCAGCTTCTGGAACCGATGTTCTTTGGTCAGTCCGTTAACGTAGCGCGTTA 4425 Query 71349 TGATCAGCAGAAGTACCCCGCGTTCGAAAAGCTGATTGAGAAACAACTTTCATTCTTCTG 71408 |||||||| || || ||||| |||||||| |||||||| || || || ||||| Sbjct 4426 CGATCAGCAAAAATATGAAATATTCGAGAAGCTGATAGAGAAACAGCTCTCCTTTTTCTG 4485 Query 71409 GCGACCTGAAGAGGTGGATGTTTCGCAAGACCGTATCGACTTCCAGGGGTTGCCAGATCA 71468 ||| || |||||||||||||| || | || || ||||||| |||| | | ||||| || Sbjct 4486 GCGTCCAGAAGAGGTGGATGTGTCTCGCGATCGCATCGACTATCAGGCGCTACCAGAACA 4545 Query 71469 TGAAAAACACATCTTCGTTTCTAACCTGAAATACCAAACCCTGCTGGACTCGATTCAGGG 71528 |||||| ||||||||| | || |||||||||||||| ||||||||||| ||||| || Sbjct 4546 TGAAAAGCACATCTTCATCAGCAATCTGAAATACCAAACACTGCTGGACTCCATTCAAGG 4605 Query 71529 TCGTAGCCCGAACGTGGCCTTGCTGCCGATCTGTTCT--ATCCCGGAACTCGAAACCTGG 71586 || ||||||||||| || ||| | ||| ||| ||| ||||| || | ||||||||| Sbjct 4606 ACGCAGCCCGAACGTCGCATTGTTACCG--CTGATCTCCATCCCAGAGTTGGAAACCTGG 4663 Query 71587 ATTGAAACCTGGGCGTTCTCTGAAACGATTCACTCGCGCTCATACACCCACATCATCCGT 71646 || ||||||||||| || || ||||| || || || || || || ||||| |||||||| Sbjct 4664 ATAGAAACCTGGGCATTTTCAGAAACCATCCATTCCCGTTCCTATACCCATATCATCCGC 4723 Query 71647 AATATCTTTACTGACCCCTCCATCGTGTTTGATGACATCGTGACCAACGAACACA---TC 71703 ||||| | | || || | | ||||| ||||| ||||| ||||| ||| | | | Sbjct 4724 AATATTGTCAACGATCCGGCACTGGTGTTCGATGATATCGTTACCAATGAAGAGATTCTG 4783 Query 71704 AAAGCGCGTGCTGAGTCCGTCACGGAGTATTACGACCAGCTGATCGAAATGACCATGTAC 71763 ||| ||||| | | || | | || ||| | ||||||||| |||||| || Sbjct 4784 AAA---CGTGCAAAAGACATCTCCTCTTTCTATGACGATCTGATCGAACTGACCAGCTAT 4840 Query 71764 CTCAACTTACTGGGTGAAGGTACTCATGTAATCAATGGTAAGAAAGTCGTGGTCTCGATG 71823 || | ||||||||||| || ||| | || ||||| | ||| || || Sbjct 4841 TATCACCTGCTGGGTGAAGGCACGCATCAGGTGAACGGTAAAACGGTCACCGTTAATCTG 4900 Query 71824 CGTGCTATCAAGCGTCTGGTCTACCTGTGCATCGTGTCGGTCAACGTGTTGGAAGCCATC 71883 | ||| | ||| | | | || |||||| | || ||||||| | ||||||||||| Sbjct 4901 CATGCCTTGAAGAAACAGCTTTATCTGTGCCTGATGAGCGTCAACGCGCTGGAAGCCATC 4960 Query 71884 CGCTTCTATGTCTCGTTTGCCTGCTCGTTTGCCTTTGCTGAACGCGAGCTGATGGAAGGC 71943 || || |||||| || |||||||| || |||||||| |||||||| |||||||| ||| Sbjct 4961 CGTTTTTATGTCAGTTTCGCCTGCTCATTCGCCTTTGCCGAACGCGAACTGATGGAGGGC 5020 Query 71944 AACGCCAAGATCATTAAACTGATCGCCCGTGATGAAGCCCTGCATCTGACCGGCACCCAG 72003 |||||||| || || |||||||||||||| |||||||| ||||| |||||||| |||||| Sbjct 5021 AACGCCAAAATTATCAAACTGATCGCCCGCGATGAAGCGCTGCACCTGACCGGTACCCAG 5080 Query 72004 CACATGATCATGTTAATGAAGTCCGGTGCTGACGATGCTGAGATGGCGGAAATCGTTAAA 72063 || ||| | | | ||| ||||| |||||| | || ||||| |||||| || Sbjct 5081 CATATGCTGAATCTGATGCGTTCCGGCCAGGACGATCCGGAAATGGCACAAATCGCCGAA 5140 Query 72064 GAGTGTGAAGCAGAAACATACGCACTCTTTAAGGACGCTGCAGAGCAGGAGAAAGACTGG 72123 | ||| || ||| |||| || ||| | |||||| ||||||||||||| ||| Sbjct 5141 GCGTGCCAACAGGAATGCTACGACCTGTTTGTGCTGGCTGCACAGCAGGAGAAAGAGTGG 5200 Query 72124 GCGAACTATCTATTCCAGGACGGGTCGATGATCGGTCTGAACAAAGAGATCGTGTGCCAG 72183 ||| | || || |||| ||||| |||||||| || ||||||||||| || | |||||| Sbjct 5201 GCGGAATACCTGTTCCGCGACGGTTCGATGATTGGCCTGAACAAAGACATTCTCTGCCAG 5260 Query 72184 TACATCGAATACATCACCAACATCCGTATTCGCGCCATCGGTTACGATGACATCTACGCC 72243 ||| | |||||||||||||| ||||| || || | |||| | || | | ||| Sbjct 5261 TACGTTGAATACATCACCAATATCCGCAT----GCAAGCGGTAGGGCTGCCCT---TGCC 5313 Query 72244 GGTGTCAAAG----CTAACCCAATCCCATGGATCAACTCCTGGTTGGTTTCTGACAACGT 72299 | | || | ||||||| ||||| ||||| || ||||| |||| ||||||||||| Sbjct 5314 GTTCCAAACGCGCACTAACCCGATCCCGTGGATTAATGCCTGGCTGGTCTCTGACAACGT 5373 Query 72300 GCAAGTCGCTCCACAGGAAGTGGAAGTAAGTTCTTATCTGGTCGGTCAGATAGACTCGAA 72359 ||| || ||||| || ||||||||||| ||||||||||||||||| || || || || | Sbjct 5374 GCAGGTTGCTCCGCAAGAAGTGGAAGTGAGTTCTTATCTGGTCGGCCAAATTGATTCTGA 5433 Query 72360 AGTGGACGCCAACGATTTCGACGATTTCCAACTGTAA 72396 | ||||| |||| | || |||||||| ||| Sbjct 5434 GATCAACGCCGACGACCTGAGTGACTTCCAACTCTAA 5470 >seq2689 Length=2575 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 165194 TCTATAGTTCAGTCGGTAGAACAGCGGACTGTTAATCCGTAGGTCGCTGGTTCGAATCCA 165253 ||| |||||||||||||||||| |||||||||||||||||| ||| ||||||||| |||| Sbjct 1458 TCTGTAGTTCAGTCGGTAGAACGGCGGACTGTTAATCCGTATGTCACTGGTTCGAGTCCA 1517 Query 165254 GCTAGACCAGCCAAA 165268 | ||| ||||||| Sbjct 1518 GTCAGAGGAGCCAAA 1532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 867297779896320