Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq2758 219 6e-52 >seq2758 Length=5450 Score = 219 bits (242), Expect = 6e-52 Identities = 309/434 (71%), Gaps = 9/434 (2%) Strand=Plus/Plus Query 87442 GGTAAATCACACTGAGCCACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACGT 87501 || |||||||| || | | || ||||| |||||||| || || || ||||||||||| Sbjct 2392 GGCAAATCACATTGCGTAATATCCCCGTTGACAATCACCGTGACATTTTCACCCAGACGG 2451 Query 87502 GTCAGGAACATTTTCATCTGTGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACC 87561 ||||||||||| |||||||| | || || ||||| ||||| || || || || || Sbjct 2452 GTCAGGAACATCTTCATCTGATTCACCGTGACATTCTGTGCTTCATCAAGAATCACCACA 2511 Query 87562 GCGTTCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTCCACCTTCTTCACA 87621 || || ||||| ||||| || |||||||| || || || || |||||||| || | Sbjct 2512 GCATTTTCAAATGTGCGCCCGCGCATATAGGCAAACGGTGCTATTTCCACTTTTCCGATC 2571 Query 87622 TCCGGGCGCAAGCAGTACTGAAGGAACGTACCACCAAGGCGTTTCTCCAGGATGTCTTGA 87681 |||||||| || ||||| || | ||||| | ||||| || || || | ||| | Sbjct 2572 TCCGGGCGTAAACAGTATTGCAAGAACGATGCGCCAAGACGCCGCTGCAATACGTCATAC 2631 Query 87682 ACCGGGCGGAAATACGGGGCGAATTTCTCGCTGATGTCCCCAGGCAAGAAGCCCAGGTTC 87741 |||||||||||||| || ||||| ||||| | || || ||||| || || || || | | Sbjct 2632 ACCGGGCGGAAATAGGGAGCGAACTTCTCAGTAATATCACCAGGTAAAAAACCAAGATCC 2691 Query 87742 TCACCGGACTCTAAGACAGGACGCGTCACGATGATGCGCTCCACCTCTTTATCCAGCAAT 87801 ||| | | || ||| || || || || || || || | || |||||||||| | || Sbjct 2692 TCATCAGCCTGTAACACCGGCCGGGTAACAATTATCCTTTCAACCTCTTTATGAATCAGC 2751 Query 87802 GCTTTGGCCGCGTGCGCAGTTGACAGGAATGTTTTACCACAACCGGCTTCACCCGTTGCA 87861 |||| || |||| | || || ||||| ||||| || || || || || ||| Sbjct 2752 GCTTCAGC------CGCACT---GAGAAACGTTTTGCCACACCCCGCCTCGCCGGTGGCA 2802 Query 87862 AAGATTAATTGCTT 87875 |||||||| || || Sbjct 2803 AAGATTAACTGTTT 2816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698522151582720