Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_023693.1 Length=148612 Score E Sequences producing significant alignments: (Bits) Value seq3741 127 2e-24 >seq3741 Length=9757 Score = 127 bits (140), Expect = 2e-24 Identities = 224/324 (69%), Gaps = 2/324 (1%) Strand=Plus/Minus Query 25457 ATATCTGGATCATTCCACGCAAGACTACACTCTGAAGTCGGATCGTAATATTCTGTACAT 25516 || || ||||| |||||| |||| || || | || | |||||||||||| ||| Sbjct 4333 ATGTCAGGATCGTTCCACAATAGACAACCTTCATCGGAAGGTTGGTAATATTCTGTGCAT 4274 Query 25517 TTGTATTCAAAATCAGCAATATCACTAATCACAACAAAGCCATGAGCGAAACCAGGAGGA 25576 ||||||||||| || || || || | |||| |||||||||| || | || || || Sbjct 4273 TTGTATTCAAAGTCTGCGATGTCGGAGAGCACAGCAAAGCCATGTGCCAGCCCTGGTGGC 4214 Query 25577 ATCCAAAATTGTGTTTTATTCTTTTCAGATAAGAGAACACCTACCCATTCTCCAAATGTT 25636 | |||||| || ||||| || | || | | | ||| || | ||||| ||| | | Sbjct 4213 AGCCAAAACTGCGTTTTGTTTTCCTCGGTGAGTAAAACGCCAAACCATTTGCCATAGCTA 4154 Query 25637 GGACTACCAACCCTAATATCTACAGCAACATCATAAACTTCACCACGAAC-ACAGCGTAC 25695 || | | | ||| || || | |||||||||||||||||||| || ||| || || Sbjct 4153 GGGGAATCTCGGCGAATGTCGACTACTACATCATAAACTTCACCACGCACTACA-CGCAC 4095 Query 25696 CAACTTCCCTTGTGGGTTTTTCTTTTGAAAATGAAGCCCACGTAGAACTCCTCGGATAGA 25755 || || || |||||| | | || || ||||| ||||| || || || | | | || Sbjct 4094 CAGTTTTCCCTGTGGGCGTGTTTTCTGGAAATGCAGCCCGCGCAGTACACTTTTCGTTGA 4035 Query 25756 ACGTGAATGGTTATCTTGGACAAA 25779 |||||| ||||| || || ||||| Sbjct 4034 ACGTGAGTGGTTGTCCTGCACAAA 4011 Score = 95.1 bits (104), Expect = 1e-14 Identities = 502/788 (64%), Gaps = 33/788 (4%) Strand=Plus/Minus Query 26012 AAAGCAATCTCTTCCAGGCATGCAACCTTCATACCTTGTTGCTTCTCTATTGCATGAACA 26071 || ||||| ||||||||||| || | |||||| || || | || || || | ||||| | Sbjct 3687 AAGGCAATTTCTTCCAGGCAAGCTATCTTCATCCCCTGACGTTTTTCAATGGTATGAATA 3628 Query 26072 AATTGAGATGCTTCCATAAGACTTTCATGTGTTCCTGTATCCAGCCAAGTGAAACCTCTT 26131 || || || ||||| || || || ||||| || || ||||||||||| | ||||||| Sbjct 3627 AACTGCGAGGCTTCAATCAGGCTATCATGGGTGCCGGTATCCAGCCAGGCAAAACCTCGG 3568 Query 26132 CCTAGTTTACAG--ACACGTAAAGTCTTTTCTT--TCC-AGTACATCTCATTTATATCCG 26186 || || ||| ||||| ||| | | ||| ||| | ||||||| || | | Sbjct 3567 CCCAG----CAGTTCCACGTTAAG-CGTGCCTTGCTCCAAATACATCTGGTTCAGCGTAG 3513 Query 26187 TAATCTCTAACTCCCCTCTAGCAGAAGGTTTAACGCTCTTAGCTTTCTGTATAACAGAAT 26246 | || ||||| || || | || ||||||||||| |||||| | | | || || Sbjct 3512 TGATTTCTAATTCACCGCGTGCGGAAGGTTTAACCTGCTTAGCCATTTCGACTACGTTAT 3453 Query 26247 TATCGTAAAAGTACAAGCCTGTGATTGCGTAGTTGCtttttggtgtttttggtttttCTT 26306 | || ||||| || | ||||| | || || | ||| || | ||||| |||| Sbjct 3452 TGTCATAAAAATAGAGCCCTGTCACCGCCCAGCTAGATTTGGGCTTAAGCGGTTTCTCTT 3393 Query 26307 CAATACTCACCACTGTACCTTCAGAATCAAACTCAACAACACCAAATCTTTCAGGATCAT 26366 |||| | || | || | |||||| || || || ||||| | || || || Sbjct 3392 CAATCGAGAGGGCTTTGAAATCTGCATCAAATTCCACTACGCCAAAGCGCTCTGGGTCGG 3333 Query 26367 TTACGTGATACCCAAAGATATTAGCTCCACCATTCTTTTCAATATGTTCTTTAGCAGAAT 26426 | || ||||| ||||| | | || || || || | || || | | | Sbjct 3332 TCACCTGATAACCAAACACCGTTGCGCC----TTGTTCT-----TGCGCTACCGGACTTT 3282 Query 26427 CTAAAATGCTACCAAAACTCTGACCAAAGAATAAATTATCACCTAGCACAAGTGCTACAG 26486 | | | |||| || ||||| ||||| | | ||| ||||| | | | ||| ||| Sbjct 3281 CCAGCTTTTTACCGAAGCTCTGGCCAAAATAGATATTGTCACCCAAAATCAATGC-GCAG 3223 Query 26487 AATCTTCACC---AATAAAGTTCTCACCAATAATAAACGCTTCTGCTAAACCTTTTGGGC 26543 ||||| ||||| | |||||||| |||||||| | ||| | || | |||| Sbjct 3222 --CGCTCACCGTTGATAAATTCTTCACCAATGATAAACGCCTGTGCCAGGCCGTCAGGGC 3165 Query 26544 TATCCTGTATTGCATA-CTGTAGGGAAATACCAAAAGAAGAACCATCACCT-AGAAGATT 26601 | ||| ||||| ||| ||| |||||||| ||||||||| | | | | Sbjct 3164 TTGGCTGCTCCGCATAGCTG-AGGTTGATACCAAAGTGGCTGCCATCACCTAACAGGCGT 3106 Query 26602 TACAA--AATTAATTTGATCTTCTGGTGTTGTAATTATTAGTATTTCCCTAATTCCAGAA 26659 | || | || | ||||| || || | || || | || ||| ||| || | Sbjct 3105 TGGAATGAGGGAA---GGTCTTCGGGGGTACTGATAATCAAGATATCCTGAATGCCTGCC 3049 Query 26660 AGCATTAGGACAGAGAGTGGATAATAAATCATAGGTTTATCGTAAATTGGTAATAGTTGT 26719 | ||| || || |||||||| ||||| | ||| ||||| || || || || | |||||| Sbjct 3048 AACATCAGCACGGAGAGTGGGTAATACACCATGGGTTTGTCATAGATGGGCAGTAGTTGC 2989 Query 26720 TTACTAACCCCTTTAGTAACTGGGTAAAGCCTTGTTCCACTACCACCTGCTAAGATAATA 26779 || | || || | |||||||| || || ||| ||| ||||| || | || Sbjct 2988 TTCGATATGCCACGGGTGATGGGGTAAAGTCTAGTGCCAGAACCGCCTGCCAATACGATG 2929 Query 26780 CCTTTCAT 26787 |||||||| Sbjct 2928 CCTTTCAT 2921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475406818652160