Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_024122.1 Length=162910 Score E Sequences producing significant alignments: (Bits) Value seq3764 95.1 1e-14 seq2351 91.5 2e-13 >seq3764 Length=2321 Score = 95.1 bits (104), Expect = 1e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 83207 TGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTAACC 83266 ||||| ||| | ||| |||||||| ||||||| ||||||||||||| ||||||||||| Sbjct 2123 TGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTCTAACC 2182 Query 83267 ACTGAGCTACGGGGCCA 83283 ||||||||| ||||||| Sbjct 2183 ACTGAGCTAAGGGGCCA 2199 >seq2351 Length=10305 Score = 91.5 bits (100), Expect = 2e-13 Identities = 280/429 (65%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 9400 CCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTATTA 9459 ||||| || || ||||||||||| || ||||| ||||| ||||||||||| || || || Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 9460 ATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGATTAT 9519 || | || || | |||| || ||||| ||||| | | |||||| | || Sbjct 2649 ATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATAC 2708 Query 9520 GTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGCCCT 9579 ||||| | ||||| || ||||| | | | || ||||||| | |||||||| Sbjct 2709 GTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCG 2768 Query 9580 ATCCGTAAAGGGGAAATGGTCCATACAGGTCTG-GTTCCATTCATCAAGTATTT---GAC 9635 || || || ||| ||||||| || ||| |||| ||| || |||| ||| Sbjct 2769 ATTCGCGGTGGTGAAGCATTCCATACTGG-CTGTATTCCTTTCTATAAACATTTCCAGAC 2827 Query 9636 TGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTATGT 9695 || |||| || ||||| || |||||| | || || ||| ||||||| | | | Sbjct 2828 ---CGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTA 2884 Query 9696 TCCCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGATTGGA 9755 || | |||||| || | || | | || || || ||||||||||| |||| Sbjct 2885 CCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGA 2944 Query 9756 AGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTCATGTTCGAGCG 9815 || ||||| | || | |||| || || | ||| | ||| | |||| |||| Sbjct 2945 AGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCG 3004 Query 9816 CCTGGTGAA 9824 |||||| || Sbjct 3005 CCTGGTCAA 3013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521158149273600