Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_024125.2
Length=168470
Score E
Sequences producing significant alignments: (Bits) Value
seq3532 188 8e-43
seq3176 150 2e-31
>seq3532
Length=11862
Score = 188 bits (208), Expect = 8e-43
Identities = 152/184 (83%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 62911 ATTACAAACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 62970
|||||| || || || || ||||| | || ||||| || |||||||| || |||| |
Sbjct 11149 ATTACAGGCTTTCAGTGAAAGTACGCGTAATCACGTCACGTTGCTGTTCTGGGGTCAATG 11208
Query 62971 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGAT 63030
|||| || || ||||||||||| || ||||||||||||| |||||| ||||||||||| |
Sbjct 11209 AGTTGAAACGCACTGCATAACCAGAAACACGGATGGTCAACTGCGGGTATTTTTCCGGGT 11268
Query 63031 GCTTAACTGCATCTTCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCAC 63090
| || || ||||||||||| |||||||| ||||||||||| |||||||||||||| || |
Sbjct 11269 GTTTTACCGCATCTTCCAGCGTTTCACGGCGCAGAACGTTCACGTTCAGGTGTTGCCCCC 11328
Query 63091 CTTC 63094
||||
Sbjct 11329 CTTC 11332
>seq3176
Length=18404
Score = 150 bits (166), Expect = 2e-31
Identities = 137/173 (79%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 62925 GTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62984
|| || ||||| | |||||||| |||||||||| ||||| ||||| ||||| ||
Sbjct 6328 GTGAAAGTACGGGTAATAACGTCTTGCTGCTGTTCTTTGGTCAGCGAGTTGAAGCGCACG 6387
Query 62985 GCATAACCGGATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCT 63044
|||||||| || ||||||||||||| |||||||||||||||||| || | | |||||
Sbjct 6388 GCATAACCAGAAACACGGATGGTCAACTGCGGATATTTTTCCGGGTGTTCCATGGCATCC 6447
Query 63045 TCCAGAGTTTCACGACGCAGAACGTTAACGTTCAGGTGTTGACCACCTTCAAT 63097
||| ||||||| || ||||| ||||||||||||||||||||||| ||
Sbjct 6448 AACAGCATTTCACGGTTCATCACGTTCACGTTCAGGTGTTGACCACCTTCGAT 6500
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 538949266790400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |