Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq10 116 9e-21 seq676 114 3e-20 >seq10 Length=2352850 Score = 116 bits (128), Expect = 9e-21 Identities = 157/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 |||||||| || || ||||| ||||| |||||||| | ||||| ||| |||||| Sbjct 820350 CAGATATTCGTGAAGACCCTCACGGGAAAGACGATCACCCTAGAAGTCGAAGCCTCTGAC 820409 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || ||||| || ||| ||||| || || || || || ||| || ||| || Sbjct 820410 ACCATCGAAAATGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCAGACCAGCAG 820469 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | | |||||||| || || |||||||| ||||| || || | | |||||||| || Sbjct 820470 CGTTTGATCTTCGCTGGTAAACAGTTGGAGGATGGGAGAACACTCTCTGATTACAATATC 820529 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||||||||| ||||| || |||||| | | |||||| Sbjct 820530 CAGAAAGAGTCCACTCTCCATCTTGTTCTTCGTCTTCGA 820568 Score = 111 bits (122), Expect = 4e-19 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||| || || || || || || ||||| | ||||| || |||||| Sbjct 820578 CAGATTTTTGTCAAGACTCTGACTGGCAAGACCATCACACTCGAAGTAGAGGCCTCTGAC 820637 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 ||| | ||| || ||| ||||| || || ||||| |||||| || ||| ||| Sbjct 820638 ACAATTGAAAACGTCAAGGCGAAGATCCAGGATAAAGAGGGAATTCCTCCAGACCAACAA 820697 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| || || || ||||||||||| |||||| | | || |||||| || Sbjct 820698 CGTCTCATCTTCGCTGGTAAACAATTGGAAGATGGCAGGACTCTCTCAGACTACAACATC 820757 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 ||||| || || ||||| ||| | || | | |||||| Sbjct 820758 CAGAAGGAATCCACTCTGCACTTGGTCCTACGTCTTCGA 820796 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || || || || || ||||| || || |||||||||| | ||| Sbjct 818766 AAAACCTTGACTGGCAAGACCATTACGTTGGAGGTTGAGGCTTCTGACACAATTGAAAAT 818825 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| || || ||||| ||||| || ||| ||| | || ||||| Sbjct 818826 GTCAAAGCCAA-GATCCAGGACAAAGAGGGAATCCCTCCAGACCAGCAACGTCTGATCTT 818884 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | || ||||| || || | | ||||| || | ||||||||||| Sbjct 818885 CGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTATAATATTCAGAAAGAGTC 818944 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||||||||| || | |||||| Sbjct 818945 CACCCTTCACCTTGTCCTGCGTCTTCGA 818972 Score = 102 bits (112), Expect = 2e-16 Identities = 149/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || ||||| || ||||| |||| || || ||||||||| | ||| Sbjct 819450 AAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCTGACACAATTGAAAAT 819509 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| || || ||||| ||||| || ||| ||| | || ||||| Sbjct 819510 GTCAAAGCCAA-GATCCAGGACAAAGAGGGAATCCCTCCAGACCAGCAACGTCTGATCTT 819568 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | || ||||| || || | | ||||| || | ||||||||||| Sbjct 819569 CGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTATAATATTCAGAAAGAGTC 819628 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||||||||| || | |||||| Sbjct 819629 CACCCTTCACCTTGTCCTGCGTCTTCGA 819656 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || ||||| || ||||| |||| || || ||||||||| | ||| Sbjct 818994 AAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCTGACACAATTGAAAAT 819053 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| || || ||||| ||||| || ||| ||| | | ||||| Sbjct 819054 GTCAAAGCCAA-GATCCAGGACAAAGAGGGAATCCCTCCAGACCAGCAACGTTTGATCTT 819112 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | || ||||| || || | | ||||| || | ||||||||||| Sbjct 819113 CGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTATAATATTCAGAAAGAGTC 819172 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||||||||| || | |||||| Sbjct 819173 CACCCTTCACCTTGTCCTGCGTCTTCGA 819200 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || ||||| || ||||| |||| || || ||||||||| | ||| Sbjct 819222 AAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCTGACACAATTGAAAAT 819281 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| || || ||||| ||||| || ||| ||| | | ||||| Sbjct 819282 GTCAAAGCCAA-GATCCAGGACAAAGAGGGAATCCCTCCAGACCAGCAACGTTTGATCTT 819340 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || |||||| | || ||||| || || | | ||||| || | ||||||||||| Sbjct 819341 CGCTGGTAAGCAGCTCGAGGATGGCAGAACCCTTTCTGATTATAATATTCAGAAAGAGTC 819400 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCGA 206391 || ||||||||||| || | |||||| Sbjct 819401 CACCCTTCACCTTGTCCTGCGTCTTCGA 819428 Score = 96.9 bits (106), Expect = 8e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| || || | || || || || ||||| ||||||| || |||||| Sbjct 820806 CAGATCTTTGTAAAGACATTGACTGGGAAGACCATCACACTGGAAGTAGAGGCCTCTGAC 820865 Query 206233 ACAGTCGAATCAGT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCA 206291 || | ||| || ||||| || ||| || || ||||| |||||| || ||| || Sbjct 820866 ACTATTGAAAATGTCAAAGCCAA-GATCCAGGACAAAGAGGGAATTCCCCCAGACCAGCA 820924 Query 206292 AAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGT 206351 | | |||||||| || || || ||||| ||||| || || | | |||||||| | Sbjct 820925 GCGTTTGATCTTCGCTGGTAAACAATTGGAGGATGGGAGAACACTCTCTGATTACAATAT 820984 Query 206352 CCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391 |||||||||||| ||||| || |||||| | | |||||| Sbjct 820985 CCAGAAAGAGTCCACTCTCCATCTTGTTCTTCGTCTTCGA 821024 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||||||||||| || ||||||||||| | |||||| |||| | || Sbjct 818972 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 818913 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || ||||| || |||||||| || |||||||| || ||||| || Sbjct 818912 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTG 818868 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||||||||||| || ||||||||||| | |||||| |||| | || Sbjct 819656 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 819597 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || ||||| || |||||||| || |||||||| || ||||| || Sbjct 819596 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAGACGTTGCTG 819552 Score = 87.8 bits (96), Expect = 4e-12 Identities = 135/190 (71%), Gaps = 2/190 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || ||||| || ||||| |||| || || ||||||||| | ||| Sbjct 819678 AAGACGTTGACTGGAAAGACCATCACCCTGGAGGTCGAGGCCTCTGACACAATTGAAAAT 819737 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| || ||| || || ||||| ||||| || ||| ||| | || ||||| Sbjct 819738 GTCAAAGCCAA-GATCCAGGACAAAGAGGGAATCCCTCCAGACCAGCAACGTCTGATCTT 819796 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| || ||||||||||||||||| | || | | || |||||| | || || || || Sbjct 819797 CGCTGGTAAGCAGTTGGAAGATGGCCGAACCCTCTCAGACTACAACATTCAAAAGGAATC 819856 Query 206364 TACTCTTCAC 206373 ||||| ||| Sbjct 819857 CACTCTGCAC 819866 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||||||||||| || ||||||||||| | |||||| |||| | || Sbjct 819200 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 819141 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || ||||| || |||||||| || |||||||| | ||||| || Sbjct 819140 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTG 819096 Score = 86.0 bits (94), Expect = 1e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204751 TCGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGT 204810 |||||| | || ||||||||||| || ||||||||||| | |||||| |||| | || Sbjct 819428 TCGAAGACGCAGGACAAGGTGAAGGGTGGACTCTTTCTGAATATTATAATCAGAAAGGGT 819369 Query 204811 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 || ||||| || |||||||| || |||||||| | ||||| || Sbjct 819368 TCTGCCATCCTCGAGCTGCTTACCAGCGAAGATCAAACGTTGCTG 819324 >seq676 Length=265522 Score = 114 bits (126), Expect = 3e-20 Identities = 162/227 (71%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 206164 AAAATGTACCAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAA 206223 |||||| |||||||| |||||||| || || || || ||||| | || || || Sbjct 178557 AAAATG---CAGATATTCGTGAAAACGCTGACGGGCAAGACCATCACCCTCGAGGTCGAG 178501 Query 206224 AGTTCTGACACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCG 206283 ||||| || |||| || ||| |||||| || || || || |||||| || Sbjct 178500 GCCTCTGATACCATCGAGAACGTGAAGGCAAAGATCCAGGATAAGGAGGGAATTCCCCCA 178441 Query 206284 GACGCTCAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGAT 206343 ||| || ||||| |||||||| ||||| || |||||||| || | ||| | | ||| Sbjct 178440 GACCAGCAGAGACTGATCTTCGCTGGAAAACAATTGGAAGACGGTCGCACTCTTTCTGAT 178381 Query 206344 TACAACGTCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 |||||| ||||||| || |||||||||||| | || | ||||||| Sbjct 178380 TACAACATCCAGAAGGAATCTACTCTTCACTTGGTCCTTCGACTTCG 178334 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 || ||||| ||| || ||||||||||| || || || | || || || || ||| Sbjct 177867 CAAATATTCGTCAAGACCCTCACAGGAAAGACCATAACCCTTGAGGTCGAGGCCTCCGAC 177808 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| || || || || || || |||||| || ||| || Sbjct 177807 ACCATCGAGAATGTGAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAG 177748 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| |||||||| ||||||||| | || |||||| | ||| | | ||||||||| || Sbjct 177747 AGACTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAACATC 177688 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || |||||||||||| | || | ||||||| Sbjct 177687 CAGAAGGAATCTACTCTTCACTTGGTCCTTCGACTTCG 177650 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| || ||||||||||| || || || | || || || || ||| Sbjct 178323 CAGATCTTCGTCAAGACCCTCACAGGAAAGACCATAACCCTTGAGGTCGAGGCCTCCGAC 178264 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| || || || || || || |||||| || ||| || Sbjct 178263 ACCATTGAGAATGTGAAGGCTAAAATCCAGGACAAGGAGGGAATTCCCCCAGACCAGCAG 178204 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 ||||| |||||||| ||||||||| | || |||||| | ||| | | ||||||||| || Sbjct 178203 AGACTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAACATC 178144 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||| || |||||||||||| | || | ||||||| Sbjct 178143 CAGAAGGAATCTACTCTTCACTTGGTCCTTCGACTTCG 178106 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||||||||| || ||||| | || || || || ||||| |||| Sbjct 177628 CAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTCGAGGCCTCCGACACCATCGAGAA 177569 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| || || || || || || |||||| || ||| || ||||| ||||| Sbjct 177568 TGTGAAGGCTAAAATCCAGGATAAGGAGGGAATTCCCCCCGACCAGCAGAGACTGATCTT 177509 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| ||||||||| | || |||||| | ||| | | ||||||||| | ||||| || || Sbjct 177508 CGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAACATTCAGAAGGAATC 177449 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| |||||| | || | ||||||| Sbjct 177448 TACCCTTCACTTGGTCCTTCGACTTCG 177422 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||||||||| || ||||| | || || || || ||||| |||| Sbjct 178084 CAAGACCCTCACAGGAAAGACCATCACCCTCGAGGTCGAGGCCTCCGACACCATCGAGAA 178025 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || || || |||||| || ||| || ||| | ||||| Sbjct 178024 TGTGAAGGCTAAGATCCAGGATAAGGAGGGAATTCCCCCAGACCAGCAGAGATTGATCTT 177965 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| ||||||||| | || |||||| | ||| | | ||||||||| | ||||| || || Sbjct 177964 CGCTGGAAAGCAGCTTGAGGATGGACGCACTCTTTCTGATTACAACATTCAGAAGGAATC 177905 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| |||||| | || | ||||||| Sbjct 177904 TACCCTTCACTTGGTCCTTCGACTTCG 177878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181760716230528