Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq3282 116 1e-21 >seq3282 Length=7904 Score = 116 bits (128), Expect = 1e-21 Identities = 192/273 (70%), Gaps = 3/273 (1%) Strand=Plus/Minus Query 224 ATGCCCACCACGATTTCAGTTGTGTAGCGATCAACGCCAGC-CTGGTCCTGCCACTTGCG 282 ||| | ||||| | ||| || || || ||||| ||| || ||| |||||||| || || Sbjct 7571 ATGTCTACCACTACTTCCGTGGTATAACGATCCT-GCCCGCTCTGATCCTGCCATTTACG 7513 Query 283 CGTTTGCAGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGAT 342 ||| |||| ||||||| |||||| ||||||||||||||| | | || | Sbjct 7512 CGTGCGCAGTTGACCTTCAACATACACCTGTGAGCCTTTGCGCAGGTATTCTCCAGCCAC 7453 Query 343 TTCTGCCAGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCC 402 ||| |||||||||||| | | |||||||||||||| || ||||||| ||| || Sbjct 7452 TTCAGCCAGCTTTCCGTACAGCGTGACGCGGTGCCATTCTGTGCGCTCTTTCTGCTCACC 7393 Query 403 TGTCTGCTTATCCTTCCAGGTTTCAGACGTGGCAATTGATAACTGCGCCACGCCGTTGCC 462 |||||||| || |||||| || |||||||| | | | | || ||| | || Sbjct 7392 GGTCTGCTTGTCGCGCCAGGTATCTGACGTGGCCAGAGTCAGGTTAGCAACGGCACCACC 7333 Query 463 GTTCGGCAGCGTGCGGAATTCTGGATCGTTGCC 495 ||||||||| |||| ||| || || ||||| Sbjct 7332 GTTCGGCAGATAACGGACTTCCGGGTC-TTGCC 7301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135395219876608