Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_025434.1 Length=62699 Score E Sequences producing significant alignments: (Bits) Value seq2373 417 3e-112 seq3888 232 3e-56 seq3010 215 2e-51 seq3868 199 2e-46 seq2778 183 1e-41 seq2494 181 4e-41 seq3413 154 6e-33 seq3597 147 9e-31 seq3116 145 3e-30 seq2489 131 7e-26 seq3174 127 8e-25 seq2992 104 9e-18 seq3161 89.7 2e-13 >seq2373 Length=3101 Score = 417 bits (462), Expect = 3e-112 Identities = 839/1238 (68%), Gaps = 12/1238 (1%) Strand=Plus/Plus Query 85 GTGGGACAAATTTGGGACATCGTCACTCAATATGTCGTCAATTTTCCTCGCGTGCTCTGT 144 ||||||| ||||||||| | || || || ||||||| || || ||| |||| Sbjct 1623 GTGGGACGGATTTGGGACGCGACCGCTAAAAATCGTATCAATTTGCCGTGCATGCACTGT 1682 Query 145 CAAATGATTAGGTGCAAGGTGTGCGTACCTACGCACCATTTCGATAGACTCCCAGCCGCC 204 | ||| || || || ||||| || || | | |||||||| || |||||||| || Sbjct 1683 GAGATGGTTTGGCGCTAGGTGCGCATATCGCTGTACCATTTCTATGCTTTCCCAGCCTCC 1742 Query 205 CATTTCCTGAAGTACTGACAGCGGTACACCTGACTGAATTAACCAACTGGCCCAAGTGTG 264 ||||||||| | | | ||||| || || |||||||||| ||||||||| ||||| ||||| Sbjct 1743 CATTTCCTGCAATGCAGACAGGGGCACGCCTGACTGAACTAACCAACTTGCCCATGTGTG 1802 Query 265 GCGGAGGTCATGAAAACGGAAATTTTCAATTCCTGCCCGACGACATGCTGTTAACCACGA 324 || || |||||||| ||||| ||||| |||||||| || | ||| | | ||| | Sbjct 1803 ACGCAGATCATGAAACCGGAAGTTTTCGATTCCTGCACGTCTCAGTGCCGCTCTCCAAGC 1862 Query 325 TGTGTTATAGTCCAGGCGCATCTTT----CTGATGCTTGGTGTCATTGTCCCGTCAGGCC 380 ||||| | || | ||||| ||| ||||||| ||| | || || ||| | Sbjct 1863 CGTGTTTGAATCAACACGCATTTTTCGTACTGATGC----TGTAGTCGTACCATCATTTC 1918 Query 381 TTCTGGCAGCAGTGGTATAAACAAACACCCAGCGGTGATGTTTGCCTATTTGATCACGCA 440 || | | || || || | ||||||||| | ||||| | ||||||||| | || Sbjct 1919 TTTTAACTGCTGTTGTGTGAACAAACACTAAATTATGATGATGGCCTATTTGCCGTCTCA 1978 Query 441 ACACCTTGCAGGCAGTGTCATTCAGTGCGACCCCAATAGCGCGGTTTGACTTACTGTCTT 500 ||| || || | |||||||| || || || ||||| || ||||||||| |||| Sbjct 1979 GCACTGCACATGCCATATCATTCAGCGCAACTCCGATAGCTCGCCCTGACTTACTATCTT 2038 Query 501 CAGGGTTTACCCAAGCAACACGTCGCTGCATATCGATTTGTTGCCACTCCAGATTAATAA 560 | || | |||||||| || ||||||||||| ||||| ||||||| || || | || Sbjct 2039 CCGGATGAACCCAAGCGACCTTGCGCTGCATATCTATTTGCTGCCACTTTAGGTTGACAA 2098 Query 561 TGTTTGATCTCCTCAGGCCAGTTGCCAGTGCAAATTTAACTACAGATTTCAGGGGATCAG 620 |||| || | | || || |||| | ||||||| || | ||| || || || || | Sbjct 2099 TGTTAGAACGACGAAGACCTGTTGATAACGCAAATTCTACGATAGACTTAAGAGGGTCGG 2158 Query 621 AACATGCATCAATGAGTCTCCTGGCTTCTTCTTTTTCCAGCCATCTCACGCGTTTGTTTT 680 ||| | ||||| || || ||||||| | ||| ||||| | || || || ||| Sbjct 2159 GGCATTCTTCAATCAGCCTTTGGGCTTCTGCGGGTTCTAGCCACCGTACCCGCTTATTTC 2218 Query 681 TTACGGCAGGTATTTTGATTACAGGTGCTTTTTCAAGCCATTTCCAGTCTCGCTCTGCGG 740 | | || | ||||| ||||||| |||||| | ||| ||||| || || || || | Sbjct 2219 TCTCTTGTGGAACCTTGATAACAGGTGATTTTTCTATCCACTTCCATTCACGTTCAGCTG 2278 Query 741 CGCGCAGAATAGCCTTGATCATTGCCAGGTGTGTTGCTTTTGTTTGCGTGCTCACCGATT 800 | |||| |||| || |||| ||| ||||| | |||||||| || |||| | Sbjct 2279 CTCGCATGATAGATTTCATCAATGCAAGGTGCTTGGCTTTTGTCGAAGTAGAAACCGGCT 2338 Query 801 TAGGTATATAGGCTGGTGGTTCTTTCCCTTTTCTTAAT-GCAGCCTCCACCTGCAACTTC 859 || ||| | | || | |||||| ||| | ||| || | | | | Sbjct 2339 CTGGAGTATGGTCACCAATGTCGATACCTTTT-TTACTCATAGCTGCCGCTTTTTGATGC 2397 Query 860 CATCTCTCCTTTGTTTTTCGGTTATACGCTTTGCTGATAACTGAGTAGATCATTGCCTCC 919 || | | | | ||||| ||| | || || | ||| || || | |||||| Sbjct 2398 CAGCGTGCTTCAGATTTTCTGTTCGTCATCTTACTCACGGCTGCATAAATTTTCGCCTCC 2457 Query 920 GATATATCCTTAATCCTTATTCCCTCGAAATGCTCAATCCAGAATGCGATTCTGGATTTA 979 | |||| |||| | | || || |||||| || ||||||| | || | | || Sbjct 2458 GTGATATTTTTAAGCAAAAAGCCTTCAAAATGCATAAGCCAGAATCCAATGCGGCCCTTG 2517 Query 980 TCGGAATCGATGGATTTCTTGTCGGCTTTTTCCTCAAGCCATCTCAGGCAGGCTTCTTCG 1039 |||| ||| | ||| || || | | ||| || |||||||| | ||| || ||||| ||| Sbjct 2518 TCGGTATCAAGGGACTTTTTATGCGATTTCTCTTCAAGCCAGCGCAGACAAGCTTCATCG 2577 Query 1040 AAAGTGACATCTGGCATATCCCCCAGTCTGTCTACTCGCCAGAGTTCTGCTTTTCGCTTG 1099 || | || || || | || ||||| | |||| ||||| ||||| |||||||| | Sbjct 2578 AAGCTTACCTCGGGAAAGTCACCCAGCTTATCTATCCGCCATAGTTCAGCTTTTCGACAG 2637 Query 1100 TCGTGCAACTCCTGAGCTTGCCGCTTGTCCTTTGTGCCAAGAGACTCCTTAATTCGCTTC 1159 ||||| |||||||||||||| ||||| |||| |||||||| || ||||| ||||| Sbjct 2638 TCGTGGAACTCCTGAGCTTGTTTTCTGTCCGTTGTTCCAAGAGATTCTTTAATACGCTTG 2697 Query 1160 CCGCCCGGGAGCGAGTACGAGGCGTACCATATTTCACCTCTGCGGAAGAGTGACATTTTC 1219 |||||||| || ||| | ||||||| | | |||||||||||| | |||||| | Sbjct 2698 CCGCCCGGCGTCGTGTAGTTGCCGTACCAGACGTTACCTCTGCGGAATAATGACATGCTT 2757 Query 1220 TTTCCTCTGTTATG-CCATCACCCGCGCTCACCTGGACAGTATGCAGCGGTGAATGAAGT 1278 ||| ||| | ||| ||||| || ||||||| |||||| |||| || | ||| Sbjct 2758 TTTTCTC-CTCATGTGCATCAACCACGCTCACGGCGACAGTGTGCATAGGATTGTTAAGA 2816 Query 1279 GCTGCAATGCAGGCTTGCCGGGTTGTGAGATAAGGTGA 1316 || ||||| || || ||| | || ||||||||||||| Sbjct 2817 GCCGCAATACATGCCTGCGGAGTAATGAGATAAGGTGA 2854 >seq3888 Length=1800 Score = 232 bits (256), Expect = 3e-56 Identities = 318/442 (72%), Gaps = 2/442 (0%) Strand=Plus/Plus Query 8509 CCAGAAAACTTTTCCGATAATCTCCACGCTTTGAGTATCTGCTTCTTCGTCAGGGTACTC 8568 |||||| | | || || ||||| |||| | | || || || ||||| |||||||| Sbjct 380 CCAGAACATTCGGCCTATTATCTCTACGCAATCCATCTCCGCCTCCTCGTCTGGGTACTC 439 Query 8569 TTCACTGTTATAACTGCGTATGATTAGTTTTCCACCGGGGCGTCTGTACAATAGCTTTAT 8628 || | |||| | || || || || || ||||| ||||| | | ||| | | | ||||| Sbjct 440 GTCGCGGTTAAAGCTACGAATTATCAGCTTTCCGCCGGGCTGACGGTAAAGTTGTTTTAT 499 Query 8629 ACGCTTCAGTTTTTCATCACCGACACCAGGCTGTGCGATGGCGTAGAGTTTGCCGTCAAC 8688 ||| ||||||| |||||| || | || || || | |||||||| | ||| |||||||| Sbjct 500 ACGTTTCAGTTGTTCATCTCCTGCTCCTGGTTGACCTATGGCGTAAATTTTACCGTCAAC 559 Query 8689 AATACGTTTGTTGTTTGTGTCTACTGCGATTGTTGTTCCATCTGGTATCACGGGTTCCAT 8748 ||| || |||||||| ||||| | || | ||| || || || || || || |||||||| Sbjct 560 AATCCGCTTGTTGTTCGTGTCAATGGCCACTGTAGTGCCGTCAGGGATAACTGGTTCCAT 619 Query 8749 GCTATCACCAGTAGCCGGAAAACAAAGCACACCAGAACCATCACTGTTAGCTCCGACACG 8808 || | || | || || || || | || |||||||||||| ||||| |||| | Sbjct 620 ACTGTTTCCCCTTGCTGGGAAGCAGATAACGCCAGAACCATCAGAATTAGCGCCGATTCT 679 Query 8809 GCGCAAGGTTGCTTTTGAGAAGCGTAATTTAAAACCATTATGATCTTCGC-AATGAACTC 8867 || | ||| | ||| ||||| || | |||| || || |||||||| | ||| | || Sbjct 680 TCGAAGGGTAGATTTAGAGAATCGCAGCATAAAGCCGTTGTGATCTTCACTCATG-ATTC 738 Query 8868 TTCCGTCACCGCATGCAAACTCAATGTCTTTCAGATATGGCACCTCAACTTCATCATCTC 8927 ||||| || || ||||| ||||| ||||||||| | |||| || ||||||||||| Sbjct 739 GTCCGTTCCCACAAGCAAATTCAATATCTTTCAGAAAATGCACTTCCACTTCATCATCGT 798 Query 8928 GTAGTGGTGTATTTCTGTCCCA 8949 | ||||| || || |||||||| Sbjct 799 GCAGTGGGGTTTTGCTGTCCCA 820 >seq3010 Length=1175 Score = 215 bits (238), Expect = 2e-51 Identities = 198/242 (82%), Gaps = 10/242 (4%) Strand=Plus/Plus Query 61724 GTCATGATGACCTCCTTTGGCTTTTTTCGAGAAATGCCACCACAAAATGTGGTGCCGGGA 61783 |||||||||||||| || | ||||||||| | | |||| | | |||||||||||| Sbjct 709 GTCATGATGACCTCGTT--GATTTTTTCGA--ATTACCACTATCGGA-GTGGTGCCGGGA 763 Query 61784 GGCTCGAAACGGCCCAAAAGATACCGCGGACTTATTCCCCTTGCGGGTGTTGTATTCGTC 61843 || |||||||||| ||| || |||||||||| ||||||||| ||||||||||||||||| Sbjct 764 GGTTCGAAACGGCTCAAC-GAGACCGCGGACTAATTCCCCTTTCGGGTGTTGTATTCGTC 822 Query 61844 GCCCTCCCGACATTGATCGGGGATGTGACCGCACACTGTGCTATCACTGAATAACAGGCA 61903 ||||||||||| ||||||||| ||||||||| | || || |||||||| ||||||| Sbjct 823 GCCCTCCCGACTCTGATCGGGG-TGTGACCGCGTAATGCGC--CCACTGAATGACAGGCA 879 Query 61904 TAAAAAATCCAACACTGACGGGGTTGGTTTAATCCGCTTTTGGGAG-GTTTTCGAGGCCT 61962 |||||||||||||||| |||||||||||| |||| || | || | |||||| |||| Sbjct 880 TAAAAAATCCAACACTAACGGGGTTGGTTCTGACCGCGTTGAGAAGAGGTTTCGACGCCT 939 Query 61963 CG 61964 || Sbjct 940 CG 941 Score = 116 bits (128), Expect = 1e-21 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 17288 CTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCACGCAAAAATGCTCGAAACTGATCAG 17347 ||| ||||||||||||||||||| || ||||| || || || ||||| ||||| |||||| Sbjct 470 CTCGTCCTCTGGACAGAACGCGGCGCTGCCCGCCATGCCAAGATGCTTGAAACAGATCAG 411 Query 17348 GCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTATTTCAGCCAGGG 17394 || ||||| |||||||||||||| || |||| | |||| || ||||| Sbjct 410 GCGTGGGAGGTGTTCGAAAAACTTGAGGACTTCCATTTTAGTCAGGG 364 >seq3868 Length=9451 Score = 199 bits (220), Expect = 2e-46 Identities = 314/450 (70%), Gaps = 10/450 (2%) Strand=Plus/Minus Query 123 CAATTTTCCTCGCGTGCTCTGTCAAATGATTAGGTGCAAGGTGTGCGTACCTACGCACCA 182 ||||||| | ||| || || |||| || |||||||| |||||||| |||||||| |||| Sbjct 1271 CAATTTTACGCGCATGTTCGGTCAGGTGGTTAGGTGCCAGGTGTGCATACCTACGGACCA 1212 Query 183 TTTCGATAGACTCCCAGCCGCCCATTTCCTGAAGTACTGACAGCGGTACACCTGACTGAA 242 |||||||||| ||||| || ||||||||||| | | || || || || || ||||||| Sbjct 1211 TTTCGATAGATTCCCACCCTCCCATTTCCTGCAAAGCAGAAAGTGGAACGCCAGACTGAA 1152 Query 243 TTAACCAACTGGCCCAAGTGTGGCGGAGGTCATGAAAACGGAAATTTTCAATTCCTGCCC 302 | ||||| || ||||| ||||| || | || || || ||||||| ||| || || |||| Sbjct 1151 TCAACCAGCTCGCCCATGTGTGCCGCAAATCGTGGAAGCGGAAATCTTCTATACCAGCCC 1092 Query 303 GACGACATGCTGTTAACCACGATGTGTTATAGTCCAGGCGCATCTTTCTGATGCTTGGTG 362 | | | | | ||| | | |||| ||| ||||| || | || || | Sbjct 1091 GTTTAAGTCCGATCCGCCATGCGCTATTATCGTCACACCGCATTTTACGTATATCAGGCG 1032 Query 363 TCATTGTCCCGTCAGGCCTTCTGGCAGCAGTGGTATAAACAAACACCCAGCGGTGATGTT 422 || | || ||||| | || | || || |||| | |||| ||||||||| || | Sbjct 1031 TCTTGGTGCCGTCTGCTCTCGTTGCCGCTTTGGTGTGGACAAGCACCCAGCGAGAGTGCT 972 Query 423 TGCCTATTTGATCACGCAACACCTTGCAGGCAGTGTCATTCAGTGCGACCCCAATAG--- 479 | || || || || || ||||||||| || || |||||||| || || ||||||| Sbjct 971 TTCCAATCTGTTCCTTCAGCACCTTGCATGCCGTATCATTCAGAGCCACGCCAATAGCCT 912 Query 480 --CGCGGTTTGACTTACTGTCTTCAGGGTTTACCCAAGCAACACGTCGCTGCATATCGAT 537 | || |||| | || || || |||| ||| ||||| || ||||||||| | Sbjct 911 TTCCCGCTTTGGC-----GTTCTCTGGATTTATCCAGGCAACCTTTCTCTGCATATCAAC 857 Query 538 TTGTTGCCACTCCAGATTAATAATGTTTGA 567 || |||||| |||| ||||||||||| Sbjct 856 CTGCAACCACTCGAGATCGATAATGTTTGA 827 >seq2778 Length=2936 Score = 183 bits (202), Expect = 1e-41 Identities = 332/483 (69%), Gaps = 2/483 (0%) Strand=Plus/Minus Query 25510 CTGGCGCTGATTGCCGCAGGGGCTTCTGCGCCTGAAATCCTGGATCAGTTTCTGGATGAA 25569 |||||||| || || || || || |||| || | || ||| || || | | |||| Sbjct 2221 CTGGCGCTAATCGCTGCTGGCGCGACTGCTCCCGTGATGATGGCGCAATTCCAGACTGAA 2162 Query 25570 AAAGAAGGTAACCACACCACGGCATACCGTGATGGTGCGGGGATCTGGACCATCTGCCGT 25629 ||||| | || | | || |||| |||||| | || |||||||| || ||| || Sbjct 2161 AAAGAGTCTGTCCGTATGAATGCCTACCCTGATGGCGGCGGTATCTGGACGATTTGCGGT 2102 Query 25630 GGAGCCACCCGGGTGGATGGTAAGCCTGTGATTCCTGGCATGAAGCTGTCGAAGGAAAAA 25689 || | || ||||| ||||| ||||| || | ||||| |||||| | || | Sbjct 2101 GGCGTGACACGGGTAGATGGCAAGCCGGTAGTGAAGGGCATAAAGCTGACCGCCGAGCAG 2042 Query 25690 TGCGACCGGGTTAACGCTATCGAACGGGATAAGGCGCTGGCATGGGTGGAGAAAAACATC 25749 |||| | || | || |||| | | |||||||| | |||||||| ||| | Sbjct 2041 TGCGCAAAGATTGATGCCGCAGAACAGCAAAAGGCGCTCGATTGGGTGGACCGTAACGTT 1982 Query 25750 AAAGTGCCACTGACTGAACCCCAGAAAGCGGGTATTGCGTCATTCTGTCCTTACAACATT 25809 |||||||| || ||||| | ||||||| || ||||| ||||| ||||| | || || Sbjct 1981 AAAGTGCCGCTCACTGAGACTCAGAAAGTCGGCATTGCCTCATTTTGTCCGTGGAATATC 1922 Query 25810 GGCCCGGGTAAGTGTTTCCCGTCGACGTTTTATAAACGAATT-AATGCAGGAGATCGAAA 25868 || || ||||| || ||| | || ||||| || | |||| |||||||| |||| | Sbjct 1921 GGTCCCGGTAACTGCTTCACCTCAACGTTCTACCG-CAAATTGAATGCAGGCGATCTGAT 1863 Query 25869 AGGTGCCTGCGAAGCGATTCGCTGGTGGATTAAGGACGGTGGCAGGGACTGCCGTATTCG 25928 |||||||| ||| |||| | ||||| |||||| || | || |||||||| || Sbjct 1862 TGGTGCCTGTAAAGAGATTAAGCGCTGGATCTGGGACGGCGGGAAAGATTGCCGTATCCG 1803 Query 25929 CTCAAATAACTGTTATGGTCAGGTATCCCGTCGTGACCAGGAGAGCGCGCTGGCGTGCTG 25988 | |||| |||||||| || ||| || || |||||||||||| || ||| | ||||| Sbjct 1802 CGCAAACAACTGTTACGGGCAGATAGAGCGGCGTGACCAGGAGTCCGAGCTTTCTTGCTG 1743 Query 25989 GGG 25991 ||| Sbjct 1742 GGG 1740 >seq2494 Length=1509 Score = 181 bits (200), Expect = 4e-41 Identities = 283/401 (71%), Gaps = 3/401 (1%) Strand=Plus/Minus Query 18382 AGATGATGGCAAACCTACGCAAAGAAGCGCGTGGCAGAGAATGCCAGGTACGGATTTATG 18441 |||| ||||| || || | ||||| || | || |||| || ||||| || | | | Sbjct 799 AGAT-ATGGCGAATCTTAGAAAAGAGGCCAGAGGTCGAGAGTGTCAGGTGAGGCTCTCGG 741 Query 18442 GCGTATGCAATGGCAATCCTGAAACTACAGTTTTGGCGCATTACCGAATGGCTGGAATTT 18501 | | || || ||||| ||||||| ||| |||| |||||||||||| | || |||| Sbjct 740 GTATCTGTAACGGCAACGCTGAAACCGTAGTGCTGGCCCATTACCGAATGTCGGGCATTT 681 Query 18502 GCGGAACGGGAATGAAGCCAGATGACCTGTTGGCTGCATGGGCCTGTAGTGACTGCCATA 18561 |||| || ||||||||||| || ||||| || | |||||||||||| || ||| || Sbjct 680 GCGGCACAGGAATGAAGCCTGACGACCTTTTTGGCGCATGGGCCTGTTCTGCCTGTCACG 621 Query 18562 ATGAAATCGATCGCCGTACTCGCATTCTCGACAACAACGACGCCAGACTTTACCACCTGG 18621 | ||||| || ||||| || || || ||| | || | ||| | || | || |||| Sbjct 620 ACGAAATAGACCGCCGCACGCGTATCACCGATGCCGACTATGCCCGGCTGCATCATCTGG 561 Query 18622 AAGGCGTGATCAGGACGCAGGCGATACTGCTGAAGGAGGGGAAAATTAAGTCATGAATGA 18681 ||||||| ||| | || |||||||| | ||| | ||||||| |||||| ||||| || Sbjct 560 AAGGCGTCATCCGCACACAGGCGATTTTACTGGCGCAGGGGAAGATTAAGCGATGAACGA 501 Query 18682 ATATGAGTTTGTGCTTCCCTGGCCGCCGACGGTGAATACCTACTGGCGAAGACG-GGGAA 18740 |||| | | || || | || || || | || ||||||||||| | ||| || Sbjct 500 ATATCACCTGAAACTGCCATATCCACCATCGTTAAACACCTACTGGCG-ACACGCACGAC 442 Query 18741 GCCAGTACTACATCAGCGATAAAGGCCAGAAATACCGAAAA 18781 | | ||||||||||||| |||||| | ||||||| || Sbjct 441 ATCGGCACTACATCAGCGAGAAAGGCAAAGCATACCGACAA 401 >seq3413 Length=1126 Score = 154 bits (170), Expect = 6e-33 Identities = 354/535 (66%), Gaps = 50/535 (9%) Strand=Plus/Plus Query 2698 TTTCGACAATGCGTTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCCAGAC 2757 |||||| || || || ||||| || |||| || || |||||||| || || |||| | Sbjct 626 TTTCGATGATCCGCTCTGCTTCGTCGCTGTCGTAAATGCCAGCAAACCCAAATGCCATGC 685 Query 2758 GGGCACACTGAATCATGGCTTTATGCCGTAACATCCGTTTGGGATGCGACTGCCACGGCC 2817 | ||||||||||||| | || || || | ||| || |||| || || ||||||||| Sbjct 686 GTGCACACTGAATCAGTGACTTGTGGCGCAGCATACGGGTGGGGTGTGATTGCCACGGCT 745 Query 2818 CCGTGATTTCTCTGCCTTCGCGAGTTTTGAATGGTGCGCGGCGGCATTCATCCATCCATT 2877 || || | || | || || |||| ||| Sbjct 746 GGGT--------------------------ATTGCGCTCA----CACTCGCCCATGTATT 775 Query 2878 CGGTAAC-ACAGATCGGATGATTACGGTCTTTGCGGTAAATCCGACATGTACAGGATTCA 2936 |||| || |||| | || || || || ||||| |||||||||| || || | | | Sbjct 776 CGGTGACTACAG-TGGGGTGTTTGCGATCTTTACGGTAAATCCTGCAAGTCGATGCGCCC 834 Query 2937 TCGTCCTGCTCAAAG------TCCATGCCATCAAACTGCTGGTTTTCGTTGATAATGCGG 2990 ||||||| || || ||||||||||| || ||| | | |||||| || || || Sbjct 835 TCGTCCTTATCGTAGCTGAATTCCATGCCATCGAATTGCGGATGTTCGTTAATGATCCGC 894 Query 2991 GACCAGCCATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAA 3050 | ||| ||||| || || || |||||||| || ||| || | ||||| ||||||||| Sbjct 895 GCCCATCCATCGACACCGACAACCGGAACAATCCCGCCCT---TGTCAGGAAAGGCGTAA 951 Query 3051 ATTTCTTTCGTCCATGGATTAAGGCCGTACTGGTTGGCAACGATCAGCAATGCGATGAAC 3110 |||||||| ||||| || || || |||||||||||||||||||| || | ||| | || Sbjct 952 ATTTCTTTTGTCCACGGGTTGAGTCCGTACTGGTTGGCAACGATAAGTAGGGCGGTAAAT 1011 Query 3111 TGCGCATCGCTGGC---ATCACCTTTAAATGCAGTCTGGCGAAGAGTGGTGATTAGTTCC 3167 ||| | || || | | | || || || || || | || ||| | |||| ||| Sbjct 1012 TGCTCGTCCGTGACGTTACCCCCCTTGAACGCCGTATTCTTCAGCGTGCTCATTAATTC- 1070 Query 3168 TGTGGGTCGACAGAATCCATGCCGACACGTTCAGCCAGCTTCCCTGCCAGCGTTG 3222 ||| | | | ||||||| | ||||||||||| || || |||| |||| Sbjct 1071 ----GGT-GCCTGGTGCCATGCCAAGGCGTTCAGCCAGTTTTCCAGCCATTGTTG 1120 >seq3597 Length=1779 Score = 147 bits (162), Expect = 9e-31 Identities = 221/309 (72%), Gaps = 14/309 (5%) Strand=Plus/Minus Query 17083 TAGTAATATACCTGTGGTGACTACAGAGCTTCTTGCCA-GCTTATATGGCACAGAACCAG 17141 || |||||| || || | || || || || | || | |||| |||| || || | | Sbjct 1473 TAATAATATTCCAGTCATTACAACTGAACTATTAGCAATGCTT-TATGCTACTGATACCG 1415 Query 17142 ATTACATCCGAAAAAAT--TTCAATCGGAATTCTGGACGATTTGTTATCGGTAAGCACTA 17199 || ||||| ||||||| |||| || || || ||||||||||| || || || || Sbjct 1414 ATAACATCAAAAAAAATCATTCA--CGTAACCAAGGGCGATTTGTTATTGGAAAACATTA 1357 Query 17200 CTTTTTACTTGAGAATGAGGAGTTGCGCGAATTTAAGCACAGCATGTCTTTAAGACCTTC 17259 ||| || || || |||||||| || | ||| |||| || ||||||| | || Sbjct 1356 CTTCAAGCTGGAAGGCGACGAGTTGCGAGAGTATAAAAACAGGGTGACTTTAAGTCACTC 1297 Query 17260 TGT-GAAAATCGCCCGTAACGTTCGCTCCCTCATCCTCTGGACAGAACGCGGAGCAGCCC 17318 || | ||| | | || ||| |||||||||||||||||| |||||||| || Sbjct 1296 AGTTGCAAAACACACG-------CGCAGCCTCATCCTCTGGACAGAGCGCGGAGCCGCAA 1244 Query 17319 GTCACGCAAAAATGCTCGAAACTGATCAGGCATGGGAAGTGTTCGAAAAACTGGAAGACT 17378 | || || || ||||| ||||| ||||||||||||||||| ||||| |||||||||||| Sbjct 1243 GACATGCCAAGATGCTTGAAACCGATCAGGCATGGGAAGTATTCGAGCAACTGGAAGACT 1184 Query 17379 GCTATTTCA 17387 |||| |||| Sbjct 1183 GCTACTTCA 1175 Score = 105 bits (116), Expect = 3e-18 Identities = 180/247 (73%), Gaps = 17/247 (7%) Strand=Plus/Plus Query 62254 TTGATTAGCCATAATTATGACTCCTGACGT-TTTAGTATTGACTGCCACC--TTAGTGG- 62309 || ||||||||| || | | ||||| | || |||||| | || || ||| ||||| | Sbjct 1506 TTTATTAGCCATGAT-AGGCCTCCTTATGTATTTAGTCT--ACGGCTACCAGTTAGTTGC 1562 Query 62310 -GGTGGCGGGCT-TCAACTA--CCGCGTCAGACGG-CGGAGCGTATTTCCCGAAAGGGTA 62364 ||| || || | |||||| || | | ||||| | | || |||| ||| ||||| Sbjct 1563 TGGTAGCCGGGTGTCAACTGAGCCACATAAGACGCTCCGGGCATATTCCCCTTGCGGGTA 1622 Query 62365 TTGTATTAGGCTCTCTCGACCCGCCATT--GATATGGCGATACCTGTAAACAGGCATAAA 62422 |||||||| || ||||| ||||| | || ||| || | || | || |||||||| Sbjct 1623 TTGTATTACGC-CTCTCCACCCGGCCTTCGGATGTGATTACGCCGTTTTACGGGCATAAA 1681 Query 62423 AAAGCCGCAAAGCTATCGGGTGCGGTTGACCGCTGACGT-TGTAGTGCGGTCAGTAT-GC 62480 ||||||||| |||||||||||||| ||||||| | || | |||||||||||||| | Sbjct 1682 AAAGCCGCATGGCTATCGGGTGCGGAAGACCGCTTATGTATTCAGTGCGGTCAGTATCCC 1741 Query 62481 GATAGCT 62487 ||||||| Sbjct 1742 GATAGCT 1748 >seq3116 Length=1110 Score = 145 bits (160), Expect = 3e-30 Identities = 226/315 (72%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 61417 CTTTTCGCACTCGATGAAGTATCGGCGTATCTGGCGGCCTTTTTCGTTACGTTCAACCAT 61476 |||||| ||||| |||||||| ||||| | ||| |||||||| ||||||||||| ||||| Sbjct 493 CTTTTCACACTCAATGAAGTAACGGCGAACCTGACGGCCTTTCTCGTTACGTTCGACCAT 552 Query 61477 CGCAAGCTCTTTGGCTGTGTCGAGGGTGAGGTGGTAATCCTTGCGGCGGCGGCCTGGAGT 61536 |||||||||||||| ||||| |||||||||||||| ||||| | || || || || Sbjct 553 GGCAAGCTCTTTGGCCGTGTCCAGGGTGAGGTGGTAGTCCTTTCTGCCTCGTCCGTGACC 612 Query 61537 TTTCGCCAAATTTGGCGAAAATAG-AATGTAGTCTAAATTTTCTACGAATCCATACTCGT 61595 | | || ||| | | |||||| |||||||| ||||| ||||| ||| |||| Sbjct 613 TATTTCCCGATTCTG-GGAAATAGCTATGTAGTCCTGATTTTTAACGAAACCAAACTCCG 671 Query 61596 TTAGCTTGGCCCGT-ATCCAGTTAGAAAAATCTTTACCTACCTCTAAAAATCCATGCAAA 61654 | | | | || ||||| | | |||| |||||||| | | ||| |||| | Sbjct 672 CAATC-CGTTCGGTAATCCACGTTGCAAAACGCTTACCTACGGCAAGGAATTCATGTAGC 730 Query 61655 TCACGCGCGTTCAC-CAGAAGCGTAGGTTCATTTGAGATTGTACCTTCAAACACAGGGAT 61713 || || || |||| || || || | ||| || || || |||| || || ||||| Sbjct 731 TCGCGTGC-ATCACAAAGTAGGGTGGATTCGTTACTTATAGTTCCTTTGAAAACGGGGAT 789 Query 61714 GAGTTGAGTGGTCAT 61728 |||||| || ||||| Sbjct 790 GAGTTGTGTTGTCAT 804 >seq2489 Length=7517 Score = 131 bits (144), Expect = 7e-26 Identities = 93/107 (87%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 17281 TCGCTCCCTCATCCTCTGGACAGAACGCGGAGCAGCCCGTCACGCAAAAATGCTCGAAAC 17340 |||| |||||||||||||||||||||||| ||||| || ||||| || ||||| ||||| Sbjct 7060 TCGCAGCCTCATCCTCTGGACAGAACGCGGTGCAGCTCGACACGCGAAGATGCTTGAAAC 7119 Query 17341 TGATCAGGCATGGGAAGTGTTCGAAAAACTGGAAGACTGCTATTTCA 17387 ||||||||||||||||||||||| |||||||||| || || |||| Sbjct 7120 CGATCAGGCATGGGAAGTGTTCGAGCAACTGGAAGATTGTTACTTCA 7166 >seq3174 Length=2500 Score = 127 bits (140), Expect = 8e-25 Identities = 316/478 (66%), Gaps = 4/478 (1%) Strand=Plus/Minus Query 143 GTCAAATGATTAGGTGCAAGGTGTGCGTACCTACGCACCATTTCGATAGACTCCCAGCCG 202 || |||||||| || | || ||||| || || || |||||||| || |||||||| ||| Sbjct 548 GTTAAATGATTTGGCGACAGATGTGCATATCTGCGTACCATTTCTATTGACTCCCAACCG 489 Query 203 CCCATTTCCTGAAGTACTGACAGCGGTACACCTGACTGAATTAACCAACTGGCCCAAGTG 262 |||||||| || | | | || | || || || || |||| || |||||| ||||| || Sbjct 488 CCCATTTCTTGTAATGCAGATAAAGGAACGCCGGATTGAACTAGCCAACTCGCCCATGTA 429 Query 263 TGGCGGAGGTCATGAAAACGGAAATTTTCAATTCCTGCCCGACGACATGCTGTTAACCAC 322 || || | |||||||| || || ||||||||||| |||| |||| | ||| Sbjct 428 TGTCGCAAATCATGAAAGCGAAAGTTTTCAATTCCGGCCCTTTTTAATGCAGCATTCCAA 369 Query 323 GATGTGTTATAGTCCAGGCGCATCTTTCTGATGCTTGGTGTCATTGTCCCGTCAGGCCTT 382 | | || ||| | | | ||||| || | || | || || | ||| || Sbjct 368 GCCTTATTTCCGTCAACTCTTAACTTTCGAATTTTAGGCATTTTTTCACCATTAGGTTTT 309 Query 383 CTGGCAGCAGTGGTATAAACAAACACCCAGCGGTGATGTTTGCCTATTTGATCACGCAAC 442 | | || | | |||||| ||||| |||| |||||| ||||| || | ||||| Sbjct 308 GTCGTAGATATTTCGTGAACAAATACCCAACGGTTATGTTTTCCTATCTGCCCGCGCAAT 249 Query 443 ACCTTGCAGGCAGTGTCATTCAGTGCGACCCCAATAGCGCGGTTTGAC--TTACTGTCTT 500 || ||| || || || ||||| || || || || ||| || || || || || Sbjct 248 ACTCCGCACGCCGTATCGTTCAGAGCAACGCCGAT--CGCCTTTCCACCTTTGGCGTTTT 191 Query 501 CAGGGTTTACCCAAGCAACACGTCGCTGCATATCGATTTGTTGCCACTCCAGATTAATAA 560 | || || | ||| | | || ||||| || | ||| ||| || || | || || Sbjct 190 CTGGATTAATCCACTCCATCTTTCTTTGCATGTCCACCTGTGACCATTCAAGGTCAAGAA 131 Query 561 TGTTTGATCTCCTCAGGCCAGTTGCCAGTGCAAATTTAACTACAGATTTCAGGGGATC 618 |||| || | | |||||| |||||||| || || |||| || | || ||| |||| Sbjct 130 TGTTAGAGCGGCGCAGGCCGGTTGCCAGCGCGAAAGTAACCACCGGCTTTAGGTGATC 73 >seq2992 Length=1942 Score = 104 bits (114), Expect = 9e-18 Identities = 132/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 18402 AAAGAAGCGCGTGGCAGAGAATGCCAGGTACGGATTTATGGCGTATGCAATGGCAATCCT 18461 ||||| || | ||| | || |||||||| || || || | || || ||||| || Sbjct 1738 AAAGAGGCTAGAGGCCGTGAGTGCCAGGTTAGGCTTCCGGGTATCTGTAACGGCAACGCT 1797 Query 18462 GAAACTACAGTTTTGGCGCATTACCGAATGGCTGGAATTTGCGGAACGGGAATGAAGCCA 18521 ||||| ||| |||| |||||||||||| | || |||||||| || ||||||||||| Sbjct 1798 GAAACCGTAGTGCTGGCCCATTACCGAATGTCCGGCATTTGCGGCACAGGAATGAAGCCT 1857 Query 18522 GATGACCTGTTGGCTGCATGGGCCTGTAGTGACTGCCATAATGAAATCGATCGCCGTACT 18581 || ||||| || | |||||||| ||| | || ||| | |||||||| || || || Sbjct 1858 GACGACCTTTTCGGCGCATGGGCTTGTTCAGGGTGTCATGACGAAATCGACCGTCGAACC 1917 Query 18582 CG 18583 || Sbjct 1918 CG 1919 Score = 100 bits (110), Expect = 1e-16 Identities = 100/130 (77%), Gaps = 0/130 (0%) Strand=Plus/Plus Query 26484 TCTGCCTGGCTTTACGTAAACTTGCTGGCTGGCTTCAGACTATCAGCCCAAATAAGGTTA 26543 ||||||| || | || || || || || ||||| ||||| ||||| | || || |||| Sbjct 595 TCTGCCTCCCTCTCCGAAAGCTCGCAGGGTGGCTCCAGACCATCAGTCTCAACAAAGTTA 654 Query 26544 AGCTCAAAATCCGAGACAAGGTGATCCAGTATCAGGAAGAGTGCGACGATGTTCTCTATG 26603 | | ||||||| ||||||||||| | |||||| | |||||||||||||| ||||| | Sbjct 655 ATCCTGAAATCCGCGACAAGGTGATGAAATATCAGAACGAGTGCGACGATGTGCTCTACG 714 Query 26604 AATACTGGAC 26613 | || ||||| Sbjct 715 AGTATTGGAC 724 >seq3161 Length=3056 Score = 89.7 bits (98), Expect = 2e-13 Identities = 103/133 (77%), Gaps = 7/133 (5%) Strand=Plus/Plus Query 62360 GGGTATTGTATTAGGCTCTCTCGACCCGCCATT--GATATGGCGATACCTGTAAACAGGC 62417 ||||||||||||| || ||||| ||||| | || ||| || | || | | ||| Sbjct 2895 GGGTATTGTATTACGC-CTCTCCACCCGGCCTTCGGATGTGATTACGCCGTTTTGCGGGC 2953 Query 62418 ATAAAAAAGCCGCAAAGCTATCGGGTGCGGTTGACCGC--TGACGTTGTAGTGCGGTCAG 62475 |||||||||||||| |||||||||||||||||||||| || ||| ||||| ||||| Sbjct 2954 ATAAAAAAGCCGCATGGCTATCGGGTGCGGTTGACCGCTTTGTAGTT-CAGTGCTGTCAG 3012 Query 62476 TAT-GCGATAGCT 62487 ||| |||||||| Sbjct 3013 TATCCCGATAGCT 3025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200502303239680