Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_025443.1 Length=52869 Score E Sequences producing significant alignments: (Bits) Value seq2563 152 2e-32 >seq2563 Length=1848 Score = 152 bits (168), Expect = 2e-32 Identities = 259/370 (70%), Gaps = 4/370 (1%) Strand=Plus/Plus Query 34521 TGAGTAATTTTAAATTCAGTCAGAGAAGCGAAAATAATCTGAAAGGGGTTAATGCGGATC 34580 ||| |||||||| |||||| | |||||| || ||| |||||| | ||| | || | Sbjct 728 TGAATAATTTTATGTTCAGTGAAAGAAGCATCAAAAATATGAAAGACATCAATCCTGA-C 786 Query 34581 TTG-TGAAAATTGTACGTCGCGCCCTTCAGTTATCATCTGTTGATTTTGGTATCACAGAA 34639 ||| | || | | || || ||||| ||||| | |||||||| || |||||| Sbjct 787 TTGCTTCAAGTAACGCAACGTGCACTTCAATTATCGATAATAGATTTTGGCATTACAGAA 846 Query 34640 GGTTTACGCACTGTTGAACGACAACGACAACTGGTCGCCACTGGTAAAAGTCAGACAATG 34699 || ||| | ||||| |||| |||||| | | ||||| || || |||||| Sbjct 847 GGAAGGCGCTCAATTGAAAGACAGAAACAACTTTTTTCACAAGGTAAGAGCCAAACAATG 906 Query 34700 AACAGTCGTCATATTTCTGGTCATGCCGTGGATGTTTTTGCTTATCCCACATCGGCTGGG 34759 || ||| | ||| || | ||||| ||||| ||||| | || || || || | | Sbjct 907 AATAGTAGGCATCTTACAGGTCACGCCGTTGATGTAGTCGCATACGTCA-ATGGTAACGT 965 Query 34760 TCATGGGAAT-GGAAATATTACGAACAGATCGCTACTGCTTTTAAACAGGCTGCAAAGGA 34818 | || ||| | |||||||||| || || || || ||| |||||||| || | ||||| Sbjct 966 TAATTGGACTTGGAAATATTATGAGCAAATTGCAGATGCATTTAAACAAGCATCGAAGGA 1025 Query 34819 ATTAAACATTCCAGTTGAATGGGGTGGTGACTGGAAAACCCTGAAAGATGGTCCACATTT 34878 ||| |||||| |||||||||| ||||| |||| ||| || |||||||| || ||||| Sbjct 1026 GTTATCCATTCCCATTGAATGGGGAGGTGATTGGACAACACTAAAAGATGGGCCTCATTT 1085 Query 34879 TCAGTTACCA 34888 ||| |||||| Sbjct 1086 TCAATTACCA 1095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169051233930496