Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_025446.1 Length=157308 Score E Sequences producing significant alignments: (Bits) Value seq2351 109 6e-19 seq3764 96.9 3e-15 seq2689 86.0 6e-12 >seq2351 Length=10305 Score = 109 bits (120), Expect = 6e-19 Identities = 252/370 (68%), Gaps = 10/370 (3%) Strand=Plus/Plus Query 4042 CCAACACCCATCATGTCCGGCGTTCGTACCCCAACCCGCCAATTCAGTTCTTGTGTTCTT 4101 ||||| || |||||||||||||| |||||||||||||| || ||||| || || || | Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 4102 ATCAAAACCGGTGACACTTTGGACTCAATCAATGCTACAGCCAAAAGTATTGTTGATTAT 4161 || | ||| |||| |||| || || || || || ||| ||| || | || Sbjct 2649 ATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATAC 2708 Query 4162 GTATCCAAACGCGCTGGGATCGGATTTGATGTCGGAGCAATTCGTGGCATCGGTAGCCCT 4221 || || | || || || ||||| || | | ||| ||||||| | |||||||| Sbjct 2709 GTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCG 2768 Query 4222 ATCCGAAAAGGTGAAATGGTGCACACAGGTCTG-GTTCCTTTC-ATAAA-ATAT-CTGAC 4277 || || |||||| | || || || ||| |||||||| ||||| || | | ||| Sbjct 2769 ATTCGCGGTGGTGAAGCATTCCATACTGG-CTGTATTCCTTTCTATAAACATTTCCAGAC 2827 Query 4278 TGGGGCATTAAAGTCTTGCTCTCAAGGCGGTATTCGTGGCGGATCAGCAAC-TTGCTATA 4336 ||| | || || ||||| || |||||| | || |||||| | ||||| ||| | || Sbjct 2828 ---CGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTA 2884 Query 4337 TCCCTATCTGGCATTATCAATTTGATGATGTTGTGGTCCTGAAGAACAACCGTGGTCTTG 4396 ||| | |||||| || | || | |||| ||||||||||||||||| | | Sbjct 2885 -CCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGG 2943 Query 4397 AAGAGAACCG 4406 ||| ||||| Sbjct 2944 AAGGCAACCG 2953 >seq3764 Length=2321 Score = 96.9 bits (106), Expect = 3e-15 Identities = 70/81 (86%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 76784 TATTTGGTGACCCTGGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCT 76843 ||| ||||| ||| | ||| |||||||| ||||||| ||||||||||||| ||||||| Sbjct 2119 TATATGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTCT 2178 Query 76844 AACCACTGAGCTACGGGGCCA 76864 ||||||||||||| ||||||| Sbjct 2179 AACCACTGAGCTAAGGGGCCA 2199 >seq2689 Length=2575 Score = 86.0 bits (94), Expect = 6e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 76389 AATTTGGCGACGATGGCAGGACTTGAACCTGCGACATATGGATTAACAGTCCACCGTTCT 76448 |||||||| | || | ||||| ||||| | |||||| ||||||||||||| ||||||| Sbjct 1534 AATTTGGCTCCTCTGACTGGACTCGAACCAGTGACATACGGATTAACAGTCCGCCGTTCT 1475 Query 76449 ACCGACTGAACTACA 76463 ||||||||||||||| Sbjct 1474 ACCGACTGAACTACA 1460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503232638423040