Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq14 150 2e-31 seq10 104 2e-17 >seq14 Length=2234412 Score = 150 bits (166), Expect = 2e-31 Identities = 482/738 (65%), Gaps = 16/738 (2%) Strand=Plus/Minus Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAG 146950 ||||||| || ||||| || || | ||||||||| ||| || | ||||| ||| | | Sbjct 776200 GATTGACGACCTGAAATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGG 776141 Query 146951 GCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCA 147010 |||| | | ||| || || || | || ||||| || | ||| || ||||| |||| Sbjct 776140 GCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCA 776081 Query 147011 CCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTC 147068 | || || || | | |||| | || || ||||| | |||| |||||| Sbjct 776080 GTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCCTTGA--GTTTAGCCCAGTC 776023 Query 147069 CCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGG 147128 ||| | | || || || |||||||||||||||||| | || | ||| | || Sbjct 776022 CCAGAGGTTTGTCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGG 775963 Query 147129 ACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAG 147188 ||| | |||| ||| | || | || || | ||||||| |||||| || Sbjct 775962 CGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTCCAG 775903 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || |||||||| | ||| ||| ||| || |||| || || || || || || Sbjct 775902 GGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTC 775843 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | | || ||||| || | || ||||| |||| |||||| | || | || || || Sbjct 775842 GAATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGG 775783 Query 147309 TCGATGCTTTTCGTTGCTG-CGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAA 147367 || || | |||| | | ||| | | | | | ||||||| ||| || || | Sbjct 775782 ACGGTGTCTCATGTTGGAGACTCTTGCCTC-CTCAACTGGATAGTAATTGACGTCGATGA 775724 Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAG 147427 | ||| ||| || | |||||||| | ||| |||||||| ||||| ||||| | Sbjct 775723 CCCTGTCGAGATTTCTGGTGACAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCATAGG 775664 Query 147428 TCCCGTCTTC----GACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483 || ||||| || | | ||| ||| || || || || |||| ||||||||| Sbjct 775663 TCT--TCTTCACTGGATCCACAAACAT--GTTGACTGCTATCGATGCCAAATTGCAGACA 775608 Query 147484 GCCGTCTCTTCGGCG-TCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 || || |||| | ||| ||||| ||||| |||| ||||| ||||||||||||||| Sbjct 775607 GCAACTTCATCGGGGCTCGA-GTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTAT 775549 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 ||| | || | ||||||| ||||| ||||| || || ||| | |||||||| || Sbjct 775548 TGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGG 775489 Query 147603 TCCGCCGGTCTCGACTTG 147620 || ||||| ||||| Sbjct 775488 AGTTCCAGTCTCAACTTG 775471 Score = 141 bits (156), Expect = 9e-29 Identities = 480/738 (65%), Gaps = 16/738 (2%) Strand=Plus/Minus Query 146891 GATTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAG 146950 ||||||| || || || || || | |||||| || ||| || | ||||| ||| | | Sbjct 232647 GATTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGGTGTAGG 232588 Query 146951 GCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCA 147010 |||| | | ||| || || || | || ||||| || | ||| || ||||| |||| Sbjct 232587 GCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCA 232528 Query 147011 CCAACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTG--CCAGTC 147068 | || || || | | |||| | || || ||||| | |||| |||||| Sbjct 232527 GTAGCAGAGAGTTCCTGACCCCGTGTTGAGATATTTTCTCCTTGA--GTTTAGCCCAGTC 232470 Query 147069 CCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGG 147128 ||| | | || || || |||||||||||||||||| | || | ||| | || Sbjct 232469 CCAGAGGTTTGTCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGG 232410 Query 147129 ACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAG 147188 ||| | |||| ||| | || | || || | ||||||| |||||| || Sbjct 232409 CGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTCCAG 232350 Query 147189 CGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTC 147248 || |||||||| | ||| ||| ||| || |||| || || || || || || Sbjct 232349 GGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTC 232290 Query 147249 GTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGG 147308 | | || ||||| || | || ||||| |||| |||||| | || | || || || Sbjct 232289 GAATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGG 232230 Query 147309 TCGATGCTTTTCGTTGCTG-CGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCAATAA 147367 || || | |||| | | ||| | | | | | ||||||| ||| || || | Sbjct 232229 ACGGTGTCTCATGTTGGAGACTCTTGCCTC-CTCAACTGGATAGTAATTGACGTCGATGA 232171 Query 147368 TCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAG 147427 | ||| ||| || | |||||||| | ||| |||||||| ||||| ||||| | Sbjct 232170 CCCTGTCGAGATTTCTGGTGACAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCATAGG 232111 Query 147428 TCCCGTCTTC----GACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACG 147483 || ||||| || | | ||| ||| || || || || |||| ||||||||| Sbjct 232110 TCT--TCTTCACTGGATCCACAAACAT--GTTGACTGCTATCGATGCCAAATTGCAGACA 232055 Query 147484 GCCGTCTCTTCGGCG-TCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 || || |||| | ||| ||||| ||||| |||| ||||| ||||||||||||||| Sbjct 232054 GCAACTTCATCGGGGCTCGA-GTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTAT 231996 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 ||| | || | ||||||| ||||| ||||| || || ||| | |||||||| || Sbjct 231995 TGTTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGG 231936 Query 147603 TCCGCCGGTCTCGACTTG 147620 || ||||| ||||| Sbjct 231935 AGTTCCAGTCTCAACTTG 231918 Score = 86.0 bits (94), Expect = 6e-12 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 || || || ||||||||||| || || ||| || ||| |||||||||||||| | Sbjct 1933591 GATTCCTTCTGAATGTTGTAATCAGACAGGGTGCGTCCATCCTCGAGCTGTTTACCAGCG 1933532 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | ||| || ||||| || ||||| || || || |||||| ||| | Sbjct 1933531 AAAATCAGCCTCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGAATTTTGGCTTTGACA 1933472 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | |||||| |||| || | || || ||||| || |||||| Sbjct 1933471 TTCTCGATTGTGTCAGAAGCCTCCACCTCGAGGGTGATGGTCTTCCCAGTTAGGGTTTTT 1933412 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 1933411 ACGAAGATCTGCATG 1933397 >seq10 Length=2352850 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 |||||| || | | || ||||| || |||||||||||| || || | |||||| Sbjct 821240 AACCAAGTGGAGTGTAGATTCTTTCTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTC 821181 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 || |||||||| | | |||| | |||||||||||||||||| ||||| || || || Sbjct 821180 CAGTTGTTTACCAGCAAAGATCAAACGCTGTTGATCTGGAGGAATGCCCTCCTTGTCCTG 821121 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 ||||| || | | ||| | || || | | ||| ||||||| || | || || Sbjct 821120 GATTTTGGCCTTGACGTTTTCAATTGTGTCAGAGGCCTCTACTTCGAGTGTGATGGTCTT 821061 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || ||||| | |||||||||||| Sbjct 821060 GCCAGTTAGGGTTTTGACGAAAATCTGCAT 821031 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 131914 AACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTC 131973 ||| | ||| | | | ||||||||||||||||||||||| | || | || || Sbjct 820100 AACGAGATGGAGGGTGGACTCTTTTTGAATGTTGTAGTCTGAAAGAGTTCTTCCGTCCTC 820041 Query 131974 GAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGT 132033 | |||||||| | |||| | ||||||||||||||| || || ||||||||||| Sbjct 820040 CAATTGTTTACCAGCGAAGATCAAACGCTGTTGATCTGGTGGGATACCTTCTTTATCTTG 819981 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 |||||| ||| | | ||| | ||| || | | || ||||| | || | ||||| Sbjct 819980 AATTTTAGCTTTAACATTTTCAATAGTGTCAGATGCTTCGACTTCCAGGGTGATGGTTTT 819921 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||| || || | ||||||||||| Sbjct 819920 GCCAGTCAATGTCTTAACAAAAATCTGCAT 819891 Score = 86.0 bits (94), Expect = 6e-12 Identities = 148/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||| ||||| || | |||| ||||| || ||||||||||| || || | | Sbjct 820333 CGCAGGACCAAGTGGAGTGTTGATTCTTTCTGGATGTTGTAGTCTGACAGAGTTCTGCCA 820274 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| || |||||||| | |||| | |||||| || ||||| || ||||| || || Sbjct 820273 TCTTCCAGTTGTTTACCAGCGAAGATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTG 820214 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || || | | || | || || | | ||||||||| | || | Sbjct 820213 TCCTGGATCTTGGCCTTGACGTTCTCAATCGTGTCAGATGCCTCCACTTCAAGTGTGATA 820154 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||||||||| |||||| | |||||||||||| Sbjct 820153 GTCTTACCAGTCAAAGTTTTCACGAAAATCTGCAT 820119 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476587560084480