Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27]
3,968 sequences; 388,752,668 total letters
Query= NC_026268.1
Length=139132
Score E
Sequences producing significant alignments: (Bits) Value
seq14 95.1 1e-14
seq10 93.3 4e-14
>seq14
Length=2234412
Score = 95.1 bits (104), Expect = 1e-14
Identities = 298/457 (65%), Gaps = 10/457 (2%)
Strand=Plus/Minus
Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698
|| ||||| || || | ||| | |||||||||||| || ||||||||||| || |||||
Sbjct 776540 ACAGTGAACTGAATGGCATTGGTGGCAGGTTTAGTCCTGAGATAGTACATTCCAGTCTTC 776481
Query 136699 AAACC--CTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGG 136756
|| || |||| | ||| || ||| || || | | | | | | | |||| ||
Sbjct 776480 AATCCAGCTTCCCAACCGAAGAA--ATGCATGGACGTGAGTTTCTCAGTGGTTGGATTGG 776423
Query 136757 CCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGT 136816
||| | || ||| || || || |||||||| ||| ||||| || || ||||| |
Sbjct 776422 CCATGTGAACATTGAGTGACTGTGACTGATCGACAAAAGCCCCGCGATCAGCAGCCATTT 776363
Query 136817 TCAATAGTACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876
| | | | | || ||| ||||| | ||| | |||| |||||| | | |
Sbjct 776362 TGAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTAGAGTGCCTTGAGGTCTGCTG 776303
Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTT---TTTGATGATTTTCATCATGAGAT 136933
| ||||| || ||| |||| | || || || || | | || | ||| ||||| |||
Sbjct 776302 GTATTTCCTCAATACTCTGAATTGACCCATTATTCGCTATTATCAGATTCTTCATGTGAT 776243
Query 136934 CAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGAT 136993
| ||| | | |||| || |||| | | ||||| |||| || || |||
Sbjct 776242 C-GTC--CCAGAGATTGCGATCAGTGAGGTCCCTCAGCAGATGGGGATTGACGACCTGAA 776186
Query 136994 ATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGT 137053
|||| || || ||||| | | ||| | || || ||| | ||||||| | ||||
Sbjct 776185 ATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGT 776126
Query 137054 TGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCAT 137090
||||||||| ||||| || || | ||||| |||||
Sbjct 776125 TGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCAT 776089
>seq10
Length=2352850
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234
||||| | ||||| || ||||| || || ||| | ||||| | |||||||||||
Sbjct 819891 ATGCAGATTTTTGTTAAGACATTGACTGGCAAAACCATCACCCTGGAAGTCGAAGCATCT 819950
Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294
|| ||||| || | || ||| |||||| |||||||| ||||| || || |||||
Sbjct 819951 GACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAA 820010
Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354
|| | | || | || || |||||| | || || | |||| | | || |||||
Sbjct 820011 CAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGACGGAAGAACTCTTTCAGACTACAAC 820070
Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378
||||||||||| |||||| | |||
Sbjct 820071 ATTCAAAAAGAGTCCACCCTCCAT 820094
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445072323317760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |