Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq14 95.1 1e-14 seq10 93.3 4e-14 >seq14 Length=2234412 Score = 95.1 bits (104), Expect = 1e-14 Identities = 298/457 (65%), Gaps = 10/457 (2%) Strand=Plus/Minus Query 136639 ACGGTGAATTGGATTGTATTCGCGGCAGGTTTAGTTCTCAGATAGTACATGCCCGTCTTT 136698 || ||||| || || | ||| | |||||||||||| || ||||||||||| || ||||| Sbjct 776540 ACAGTGAACTGAATGGCATTGGTGGCAGGTTTAGTCCTGAGATAGTACATTCCAGTCTTC 776481 Query 136699 AAACC--CTTCTCCCAGGAATAATTATGTATAGATGACAAAATTTTATAGCTCGGATCGG 136756 || || |||| | ||| || ||| || || | | | | | | | |||| || Sbjct 776480 AATCCAGCTTCCCAACCGAAGAA--ATGCATGGACGTGAGTTTCTCAGTGGTTGGATTGG 776423 Query 136757 CCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAGGTCCGCGGTCTGCGGCCATGT 136816 ||| | || ||| || || || |||||||| ||| ||||| || || ||||| | Sbjct 776422 CCATGTGAACATTGAGTGACTGTGACTGATCGACAAAAGCCCCGCGATCAGCAGCCATTT 776363 Query 136817 TCAATAGTACTTTTTGCTTAATTTCCCAAGCGGTTTTAAAGAGCTCCTTGACATTGGGCG 136876 | | | | | || ||| ||||| | ||| | |||| |||||| | | | Sbjct 776362 TGAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTAGAGTGCCTTGAGGTCTGCTG 776303 Query 136877 GAATTTCATCGATATTCTGTACAGATCCGTTGTT---TTTGATGATTTTCATCATGAGAT 136933 | ||||| || ||| |||| | || || || || | | || | ||| ||||| ||| Sbjct 776302 GTATTTCCTCAATACTCTGAATTGACCCATTATTCGCTATTATCAGATTCTTCATGTGAT 776243 Query 136934 CAGTCGAGTATACGTTGCTCTCTATGAGTTTATCGACGAGATGCTGATTTACTACTTGAT 136993 | ||| | | |||| || |||| | | ||||| |||| || || ||| Sbjct 776242 C-GTC--CCAGAGATTGCGATCAGTGAGGTCCCTCAGCAGATGGGGATTGACGACCTGAA 776186 Query 136994 ATTCGCCCGATAGCACTCTGCGTACGTACAGATTACTAGTGAACGGCTCGAACGATTCGT 137053 |||| || || ||||| | | ||| | || || ||| | ||||||| | |||| Sbjct 776185 ATTCACCAGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGT 776126 Query 137054 TGTTACCCAAAATCTGTGCAGTCGTCGCTGTCGGCAT 137090 ||||||||| ||||| || || | ||||| ||||| Sbjct 776125 TGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCAT 776089 >seq10 Length=2352850 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||| || ||||| || || ||| | ||||| | ||||||||||| Sbjct 819891 ATGCAGATTTTTGTTAAGACATTGACTGGCAAAACCATCACCCTGGAAGTCGAAGCATCT 819950 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || ||||| || | || ||| |||||| |||||||| ||||| || || ||||| Sbjct 819951 GACACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAA 820010 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 || | | || | || || |||||| | || || | |||| | | || ||||| Sbjct 820011 CAGCGTTTGATCTTCGCTGGTAAACAATTGGAGGACGGAAGAACTCTTTCAGACTACAAC 820070 Query 25355 ATTCAAAAAGAATCCACCATTCAT 25378 ||||||||||| |||||| | ||| Sbjct 820071 ATTCAAAAAGAGTCCACCCTCCAT 820094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445072323317760