Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq10 114 1e-20 seq14 111 1e-19 seq676 91.5 1e-13 >seq10 Length=2352850 Score = 114 bits (126), Expect = 1e-20 Identities = 141/193 (73%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| || | || |||| | || ||||| || ||||| || || Sbjct 820309 TCTTTCTGGATGTTGTAGTCTGACAGAGTTCTGCCATCTTCCAGTTGTTTACCAGCGAAG 820250 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||||||||| | |||| || |||||||||| |||||| ||| | | Sbjct 820249 ATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTC 820190 Query 35666 GCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACA 35725 | | |||||| | ||||| || | ||||| || ||||| |||||||||||||| Sbjct 820189 TCAATCGTGTCAGATGCCTCCACTTCAAGTGTGATAGTCTTACCAGTCAAAGTTTTCACG 820130 Query 35726 AATATCTGCATTC 35738 || |||||||||| Sbjct 820129 AAAATCTGCATTC 820117 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | ||||| || | || ||||||||||||||||| || | Sbjct 819891 TTCCACCACGAAGACGTAGGACCAAGTGCAGAGTGGATTCCTTTTGAATGTTGTAGTCTG 819832 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | |||||| | || |||| ||||||||| || || |||| || |||||||| | || Sbjct 819831 AGAGGGTTCGGCCATCTTCCAACTGCTTACCAGCGAAGATCAGACGTTGCTGGTCTGGAG 819772 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 | | | ||| |||||| |||||| || | | || | | ||||| | || | Sbjct 819771 GGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATTTTCAATTGTGTCAGAGGCCTCGA 819712 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 |||||| ||||| || || || ||||| || ||||| || |||||||| Sbjct 819711 CCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCACGAAGATCTGCAT 819663 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || || |||||||| | | |||| | | || |||| ||| ||||| || || Sbjct 820538 CTCTTTCTGGATATTGTAATCAGAGAGTGTTCTCCCATCCTCCAACTGTTTACCAGCGAA 820479 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| || |||||| ||| |||||| ||| | | | Sbjct 820478 GATCAAACGCTGCTGGTCTGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACATT 820419 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | ||| || || | |||||||| || ||||| | || ||||| Sbjct 820418 TTCGATGGTGTCAGAGGCTTCGACTTCTAGGGTGATCGTCTTTCCCGTGAGGGTCTTCAC 820359 Query 35725 AAATATCTGCATTC 35738 ||||||||||||| Sbjct 820358 GAATATCTGCATTC 820345 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||| || ||||| | | ||||| | || || ||||||||||| || || Sbjct 818942 CTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAA 818883 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||||| | ||| | | ||| |||||| |||||| || | | | Sbjct 818882 GATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATT 818823 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | || ||||||| ||| || || || || ||||| |||||||| Sbjct 818822 TTCAATTGTGTCAGAAGCCTCAACCTCCAACGTAATGGTCTTGCCAGTCAAGGTTTTCAC 818763 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 818762 GAAGATCTGCAT 818751 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||| || ||||| | | ||||| | || || ||||||||||| || || Sbjct 819170 CTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAA 819111 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || |||||||| | ||| | | ||| |||||| |||||| || | | | Sbjct 819110 GATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATT 819051 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | || ||||||| ||||| || || || ||||| || ||||| Sbjct 819050 TTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCAC 818991 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 818990 GAAGATCTGCAT 818979 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||| || ||||| | | ||||| | || || ||||||||||| || || Sbjct 819398 CTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAA 819339 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || |||||||| | ||| | | ||| |||||| |||||| || | | | Sbjct 819338 GATCAAACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATT 819279 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | || ||||||| ||||| || || || ||||| || ||||| Sbjct 819278 TTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCAC 819219 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 819218 GAAGATCTGCAT 819207 Score = 89.7 bits (98), Expect = 5e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || ||||| || ||||| | | ||||| | || || ||||||||||| || || Sbjct 819626 CTCTTTCTGAATATTATAATCAGAAAGGGTTCTGCCATCCTCGAGCTGCTTACCAGCGAA 819567 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| || |||||||| | ||| | | ||| |||||| |||||| || | | | Sbjct 819566 GATCAGACGTTGCTGGTCTGGAGGGATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATT 819507 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | || ||||||| ||||| || || || ||||| || ||||| Sbjct 819506 TTCAATTGTGTCAGAGGCCTCGACCTCCAGGGTGATGGTCTTTCCAGTCAACGTCTTCAC 819447 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 819446 GAAGATCTGCAT 819435 Score = 86.0 bits (94), Expect = 6e-12 Identities = 134/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || || |||||||| | | |||| | | || |||| || ||||| || || Sbjct 820994 CTCTTTCTGGATATTGTAATCAGAGAGTGTTCTCCCATCCTCCAATTGTTTACCAGCGAA 820935 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| | ||| |||||| |||||| || | | | Sbjct 820934 GATCAAACGCTGCTGGTCTGGGGGAATTCCCTCTTTGTCCTGGATCTTGGCTTTGACATT 820875 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | | ||||| | || || |||| ||||| || || || ||||| || || || Sbjct 820874 TTCAATAGTGTCAGAGGCCTCTACTTCCAGTGTGATGGTCTTCCCAGTCAATGTCTTTAC 820815 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 820814 AAAGATCTGCAT 820803 >seq14 Length=2234412 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 ||||||||||| || | ||||| || | || ||||| |||||||||||||| | | Sbjct 1933624 CCACCACGTAATCTGAGTACCAAGTGAAGTGTCGATTCCTTCTGAATGTTGTAATCAGAC 1933565 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || | || || ||||| ||||| || || |||| || ||||||||| | ||| Sbjct 1933564 AGGGTGCGTCCATCCTCGAGCTGTTTACCAGCGAAAATCAGCCTCTGCTGGTCTGGGGGA 1933505 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCAC 35688 | || |||||||||| ||| ||| || || | | | | | ||||| | ||||| Sbjct 1933504 ATGCCCTCCTTGTCC-TGAATTTTGGCTTTGACATTCTCGATTGTGTCAGAAGCCTCCAC 1933446 Query 35689 CTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 ||| | ||||| || || || || | ||||| || || |||||||| Sbjct 1933445 CTCGAGGGTGATGGTCTTCCCAGTTAGGGTTTTTACGAAGATCTGCAT 1933398 >seq676 Length=265522 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| ||||| || ||||||||||| | | || || |||| ||| Sbjct 178346 ACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGACCGTCTTCC 178405 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 | || || || || || |||| | ||||||||| | |||| | |||||| ||| | Sbjct 178406 AATTGTTTTCCAGCGAAGATCAGTCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGG 178465 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||||| ||||| | | | || || | || ||||| | ||||| || || Sbjct 178466 ATCTTTGCCTTCACGTTCTCGATGGTATCAGAGGCCTCGACCTCGAGGGTGATGGTCTTG 178525 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||||| |||||||| |||||||||||| Sbjct 178526 CCCGTCAGCGTTTTCACGAATATCTGCATT 178555 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | ||| ||||| |||||||||||||| | | || || | || || Sbjct 177890 ACCAAGTGAAGGGTAGATTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGTCCATCCTCA 177949 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 |||||||| || || || ||||| | ||||||||| | |||| | |||||| ||| | Sbjct 177950 AGCTGCTTTCCAGCGAAGATCAATCTCTGCTGGTCTGGGGGAATTCCCTCCTTATCCTGG 178009 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 ||||| ||||| | | | | |||||| | || ||||| | ||||| || || Sbjct 178010 ATCTTAGCCTTCACATTCTCGATGGTGTCGGAGGCCTCGACCTCGAGGGTGATGGTCTTT 178069 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || || || ||||| Sbjct 178070 CCTGTGAGGGTCTTGACGAAGATTTGCAT 178098 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450771240637440