Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_026607.2 Length=159914 Score E Sequences producing significant alignments: (Bits) Value seq2351 176 5e-39 seq3764 123 3e-23 >seq2351 Length=10305 Score = 176 bits (194), Expect = 5e-39 Identities = 318/460 (69%), Gaps = 10/460 (2%) Strand=Plus/Minus Query 133268 TGCAGACCATAGTCTAGATGACGAATACGGTTTTCATCTACGCCTTTGTTGTTCTTTAAT 133327 |||| || || || || ||||| | ||||| | || ||||| ||||||||| | Sbjct 2980 TGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCCACGGTTGTTCTTCAGC 2921 Query 133328 ACCAACAGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCA 133387 |||| |||| |||| || || |||||||||| || ||| | | || || || || || Sbjct 2920 ACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAACGTTGCCGCTCCGCCG 2861 Query 133388 CGTACACCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATT 133447 || |||||||| || || || ||||| ||||| ||||| |||||||| |||||||||| Sbjct 2860 CGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATGTTTATAGAAAGGAATA 2801 Query 133448 ACGCCAGTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCG 133507 ||||||||| | |||| ||| | ||| || || ||||| |||| Sbjct 2800 CAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAGCGCACGAATACGACCG 2741 Query 133508 GCGTTGATGCCGATACCAGCTCGCTTGCTGATA--TACTT---AATAATACTGTTACTTG 133562 ||||| ||||||||||| || |||| ||| | || || ||| |||| | || Sbjct 2740 GCGTTAATGCCGATACCGGCACGCT--GTGAAACGTATTTCACGATAGCACTG-GAGGTG 2684 Query 133563 CCGCATTAATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGAC 133622 || ||||| |||| ||| ||||| ||||| | || || || || ||||||| Sbjct 2683 --GCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGAGCTGAACTGAC 2626 Query 133623 GAGTAGGAGTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAATCTGTCGAGTAGATA 133682 | || || ||||| | || | ||| ||||| || ||||||||||||| ||||| | Sbjct 2625 GGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCTTGAAGGTAGAAA 2566 Query 133683 CAGCGTCATAAAAGCGAATAATATGAGCCAGACGATTTTC 133722 |||||||| ||||| | | | | ||||||| |||| Sbjct 2565 TCGCGTCATAGAAGCGTTTGACGTAATCCAGACGCGTTTC 2526 >seq3764 Length=2321 Score = 123 bits (136), Expect = 3e-23 Identities = 76/81 (94%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 62444 TTATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTC 62503 |||| |||||||||||| ||| |||||||| |||||||||||||||||||||||||||| Sbjct 2118 TTATATGGTGGCCCCTGTTGGGTTTGAACCAACGACCAAGCGATTATGAGTCGCCTGCTC 2177 Query 62504 TAACCACTGAGCTAAGGGGCC 62524 ||||||||||||||||||||| Sbjct 2178 TAACCACTGAGCTAAGGGGCC 2198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511571424798720