Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027119.1 Length=157498 Score E Sequences producing significant alignments: (Bits) Value seq2351 96.9 3e-15 >seq2351 Length=10305 Score = 96.9 bits (106), Expect = 3e-15 Identities = 281/429 (66%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 60074 CCAACACCTATTATGTCCGGCGTCCGCACCCCGACCCGACAGTTCAGCTCTTGTGTATTG 60133 ||||| || || ||||||||||| || ||||| ||||| ||||||||||| || || ||| Sbjct 2589 CCAACGCCGATCATGTCCGGCGTGCGTACCCCAACCCGTCAGTTCAGCTCCTGCGTGTTG 2648 Query 60134 ATCAAAACTGGTGATACATTGGACTCAATTAATGCCACTGCGAAAAGCATCGTGGATTAT 60193 || | || || | |||| || ||||| ||||| | | |||||| | || Sbjct 2649 ATTGAGTGCGGCGACAGCCTGGATTCCATTAACGCCACCTCCAGTGCTATCGTGAAATAC 2708 Query 60194 GTTTCCAAACGTGCTGGCATCGGATTCGATGTTGGGGCAATTCGTGGCATCGGTAGCCCT 60253 ||||| | ||||| || ||||| | | | || ||||||| | |||||||| Sbjct 2709 GTTTCACAGCGTGCCGGTATCGGCATTAACGCCGGTCGTATTCGTGCGCTGGGTAGCCCG 2768 Query 60254 ATCCGTAAAGGGGAAATGGTCCATACAGGTCTG-GTTCCATTCATCAAGTATTT---GAC 60309 || || || ||| ||||||| || ||| |||| ||| || |||| ||| Sbjct 2769 ATTCGCGGTGGTGAAGCATTCCATACTGG-CTGTATTCCTTTCTATAAACATTTCCAGAC 2827 Query 60310 TGGTGCCCTGAAGTCTTGCTCTCAAGGCGGTATCCGTGGTGGATCGGCAACATGCTATGT 60369 || |||| || ||||| || |||||| | || || ||| ||||||| | | | Sbjct 2828 ---CGCAGTGAAATCCTGCTCACAGGGCGGTGTGCGCGGCGGAGCGGCAACGTTGTTTTA 2884 Query 60370 TCCCATCTGGCATTATCAATTTGATGATGTCGTTGTTCTCAAAAACAACCGTGGATTGGA 60429 || | |||||| || | || | | || || || ||||||||||| |||| Sbjct 2885 CCCGCTGTGGCATCTGGAAGTGGAAAGCCTGCTGGTGCTGAAGAACAACCGTGGCGTGGA 2944 Query 60430 AGAGAACCGTGAACGCCGTATCGACTATGGGATTCAGATTAACCGCGTCATGTTCGAGCG 60489 || ||||| | || | |||| || || | ||| | ||| | |||| |||| Sbjct 2945 AGGCAACCGCGTGCGTCACCTCGATTACGGCGTGCAGTTGAACAAGCTGATGTATCAGCG 3004 Query 60490 CCTGGTGAA 60498 |||||| || Sbjct 3005 CCTGGTCAA 3013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 503840608266240