Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq14 262 5e-65 seq320 95.1 2e-14 seq9 86.0 9e-12 >seq14 Length=2234412 Score = 262 bits (290), Expect = 5e-65 Identities = 857/1315 (65%), Gaps = 31/1315 (2%) Strand=Plus/Minus Query 68374 GTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCGGTTTTCAGA 68433 || |||||||||| || || ||||| || | ||||||||||| || || |||| Sbjct 776537 GTGAACTGAATGGCATTGGTGGCAGGTTTAGTCCTGAGATAGTACATTCCAGTCTTCAAT 776478 Query 68434 CCTAGACTCC-ATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGATCGGCTAT 68492 || || ||| | ||| |||||||||| || ||||| | |||||| ||| || Sbjct 776477 CC-AGCTTCCCAACCGAAGAAATGCATGGACGTGAGTTTCTCAGTGGTTGGATTGGCCAT 776419 Query 68493 ATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCCATTTTTAT 68552 |||| ||| | || || ||||||| ||||| || | ||| || |||||||| | Sbjct 776418 GTGAACATTGAGTGACTGTGACTGATCGACAAAAGCCCCGCGATCAGCAGCCATTTTGAG 776359 Query 68553 AATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATCATCTGGAAG 68612 || || | || ||||| ||||| | || | | | |||| || |||| | Sbjct 776358 GATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTAGAGTGCCTTGAGGTCTGCTGGTAT 776299 Query 68613 G--CTCG-TATTTTGAATGGATCCACCATCGGATATAATTATATTCTTGATCTCATCATT 68669 ||| || | ||||| || ||| || | ||| || | |||||| || | ||| | Sbjct 776298 TTCCTCAATACTCTGAATTGACCCATTATTCGCTATTATCAGATTCTTCATGTGATCGTC 776239 Query 68670 CCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATTTGAAATTCCCC 68729 ||| | || | || || | | || || ||||| ||||| || | |||||||| || Sbjct 776238 CCAGAGATTGCGATCAGTGAGGTCCCTCAGCAGATGGGGATTGACGACCTGAAATTCACC 776179 Query 68730 AGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCATTATTTCC 68789 ||| | ||| | | | ||| || || ||||| || || || | | || || || || Sbjct 776178 AGACAGCACACGCCTGGAGTAGATGTTGCTGGTGTAGGGCTCGATGGCCTCGTTGTTACC 776119 Query 68790 CAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACC 68849 ||| || || || |||||||| |||||||| ||||||| | | | || || |||| Sbjct 776118 CAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGCCAGTAGCAGAGAGTTCCT--GACC 776061 Query 68850 ATGTGTTATGATTTTATCTTTTAGATGTTT---CCAATCCCAAAGATCAGATGGTACAAC 68906 ||||| ||| || ||| | || |||| ||| ||||| || | | ||| || Sbjct 776060 CCGTGTTGAGATATTTTCTCCTTGA-GTTTAGCCCAGTCCCAGAGGTTTGTCGGTGTGAC 776002 Query 68907 ATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATTATATGTTTCATA 68966 | ||| | ||||| || || || || | || | || || || || || || || Sbjct 776001 ACCCCACATGTCGTACTGGAGGATGCCCTGGCTGACTGGCGAGCCTTTGTACGTCTCGTA 775942 Query 68967 AGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTAATAAATTGTTTC 69026 || || | || || || |||||||| |||||| | ||||| || || | || || Sbjct 775941 AGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTCCAGGGCACCATAGTAGAGGGTCTC 775882 Query 69027 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACTATCGAATGGATAATGTAAAAGAAT 69086 ||| |||| | ||||| | || || || ||| |||||||||||| | | || | Sbjct 775881 GAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACTGTCGAATGGATAACGCATCAGTAG 775822 Query 69087 AAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGTCTCTTATTTGA-AC 69145 ||||||||||||| |||||||| ||||| || || || | |||||| | || || || Sbjct 775821 GAATGCATCTGCCAGACCCTGAACTCCAATTCCCATGGGACGGTGTCTCATGTTGGAGAC 775762 Query 69146 TTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTAAGATTTCGGACTA 69205 | | || || || ||||| ||||| | || || | | | ||||||| | | Sbjct 775761 TCT-TGCCTCCTCAACTGGATAGTAATTGACGTCGATGACCCTGTCGAGATTTCTGGTGA 775703 Query 69206 CTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAAA-----TCGTCCATCTAT-AACAA 69259 | ||||| || || ||| |||||| || ||| | || || | || |||| Sbjct 775702 CAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCATAGGTCTTCTTCACTGGATCCACAA 775643 Query 69260 ACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTAGAATTTGCATATT 69319 |||| || | ||||| ||||| | ||| || || || || |||| | | | || | Sbjct 775642 ACATGTTGACTGCTATCGATGCCAAATTGCAGACAGCAACTTCATCGGGGCTCGAGTACT 775583 Query 69320 GTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTTTGCTGATTACTCT 69379 | ||||| || || | || || ||||| || || || || || | |||||| | Sbjct 775582 CAACGATCTCGGTGCACAAGTTGCTGCATTTTATTGTTCCAAGGTTCTTCTGATTGGATT 775523 Query 69380 TTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCAA--TCTGAGATTC 69437 | |||| ||||| |||||||| || || | ||||| ||||| |||| | ||| ||| Sbjct 775522 TCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAGTTCCAGTCTCAACTTGTGACATT- 775464 Query 69438 GATAATAGATTTCCAAACGACC----CTAGCATTTATTACGGTCTTGTAACGCTTCTCTT 69493 | ||| | | |||| | || || ||| | | ||| ||||||||| ||| | Sbjct 775463 -AGAATTGCTGTCCACAGCTCCCGGGCTGGCACT--TGACG--CTTGTAACGAGCCTCCT 775409 Query 69494 TTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAATCCAGGAC 69553 || || | ||| || ||| |||||||| || |||||| ||| | || |||| Sbjct 775408 CCTCGTACTTTGTGTACAGCTTATCGAATTCCTCACCCCAAGTGTCACAGAGGCCTGGAC 775349 Query 69554 ATTCATTTGGACACATCAATGACCACACATCATCATCCTTAACTCGTTTCATAAATAGAT 69613 | || | || ||||||| ||| | | || || || |||||||| || | || Sbjct 775348 ACTCGTGGGGGCACATCAGACTCCAGGGACCGTCTGCCAGGACACGTTTCATGAACAAAT 775289 Query 69614 CGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTCCTGT 69668 |||| ||||| || || || || || | | || | ||| || |||||||| Sbjct 775288 CGGGTATCCACAGGGCGTAGAATAGCTCACGTGCTCGGTATTCCTCTTTTCCTGT 775234 Score = 255 bits (282), Expect = 8e-63 Identities = 833/1278 (65%), Gaps = 31/1278 (2%) Strand=Plus/Minus Query 68410 AGATAGTACATACCGGTTTTCAGACCTAGACTCC-ATCCGTAGAAATGCATACTTGTTAG 68468 ||||||||||| || || |||| || || ||| | ||| |||||||||| || || Sbjct 232948 AGATAGTACATCCCAGTCTTCAATCC-AGCTTCCCAACCGAAGAAATGCATGGACGTGAG 232890 Query 68469 TTTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGC 68528 || | ||||| ||| || |||| ||| |||| || |||||||| ||||| Sbjct 232889 CTTCTCAGGGGTTGGACTGGCCATGTGAACATTGGTCGACTGGGACTGATCGATAAAAGC 232830 Query 68529 TCCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAA 68588 |||| ||| || |||||||| | || || | || ||||| ||||| | || | | Sbjct 232829 CCCTCGATCAGCAGCCATTTTCAGGATCATCCTCTGGGGAATCTCCCAGACTGTTCTGTA 232770 Query 68589 AATCTGTTTGATATCATCTGGAAGG--CTCG-TATTTTGAATGGATCCACCATCGGATAT 68645 | ||||| || |||| | |||| || | || || || ||| | | ||| Sbjct 232769 CAGTGCCTTGATGTCTGCTGGTATTTTCTCGATACTCTGGATCGACCCATTGTTCGCTAT 232710 Query 68646 AATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATG 68705 || | |||||| || || || | ||| | | | || || | | | |||||||| Sbjct 232709 TATCAGATTCTTCATGTCGTCGTCCCAGAGATCGCGTTCAGTGAGGTCCTTCAGGAGATG 232650 Query 68706 CGGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATA 68765 ||||| || | || ||||| ||||| | ||| | | | ||| || || ||||| || Sbjct 232649 GGGATTGACGACCTGGAATTCACCAGACAGCACGCGCCTGGAGTAGATGTTGCTGGTGTA 232590 Query 68766 TGGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGC 68825 || || | | || || || ||||| || || || |||||||| |||||||| ||||| Sbjct 232589 GGGCTCGATGGCCTCGTTGTTACCCAGGATCTGGGCTGTTGATGCTGTTGGCATTGGTGC 232530 Query 68826 CACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTT---CCA 68882 || | | | || || |||| ||||| ||| || ||| | || |||| ||| Sbjct 232529 CAGTAGCAGAGAGTTCCT--GACCCCGTGTTGAGATATTTTCTCCTTGA-GTTTAGCCCA 232473 Query 68883 ATCCCAAAGATCAGATGGTACAACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGC 68942 ||||| || | | ||| ||| ||| | ||||| || || || || | || | Sbjct 232472 GTCCCAGAGGTTTGTCGGTGTGACACCCCACATGTCGTACTGGAGGATGCCCTGGCTGAC 232413 Query 68943 ATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTC 69002 || || || || || || |||| || | || || || |||||||| |||||| Sbjct 232412 TGGCGAGCCTTTGTACGTCTCGTAAGTACCCTTCTCTTGGGCGAGTTCACAGGATGCCTC 232353 Query 69003 TAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGACT 69062 | ||||| || || | || ||||| |||| | ||||| | || || || ||| Sbjct 232352 CAGGGCACCATAGTAGAGGGTCTCGAAGATCTGGATGTTGAGTTTCTGGGCCTCATCACT 232293 Query 69063 ATCGAATGGATAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGAT 69122 |||||||||||| | | || | ||||||||||||| |||||||| ||||| || || Sbjct 232292 GTCGAATGGATAACGCATCAGTAGGAATGCATCTGCCAGACCCTGAACTCCAATTCCCAT 232233 Query 69123 AGGTCTATGTCTCTTATTTGA-ACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTA 69181 || | |||||| | || || ||| | || || || ||||| ||||| | || | Sbjct 232232 GGGACGGTGTCTCATGTTGGAGACTCT-TGCCTCCTCAACTGGATAGTAATTGACGTCGA 232174 Query 69182 TAATTTTATTAAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCAA 69241 | | | | ||||||| | || ||||| || || ||| |||||| || ||| Sbjct 232173 TGACCCTGTCGAGATTTCTGGTGACAACTTTGACGACTGTCTTGAGTTTGTCGAAGTCAT 232114 Query 69242 A-----TCGTCCATCTAT-AACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTG 69295 | || || | || |||||||| || | ||||| ||||| | ||| || || | Sbjct 232113 AGGTCTTCTTCACTGGATCCACAAACATGTTGACTGCTATCGATGCCAAATTGCAGACAG 232054 Query 69296 CTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAG 69355 | || |||| | | | || | | ||||| || || | || || ||||| || | Sbjct 232053 CAACTTCATCGGGGCTCGAGTACTCAACGATCTCGGTGCACAAGTTGCTGCATTTTATTG 231994 Query 69356 TCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAG 69415 | || || || | |||||| || |||| ||||| |||||||| || || | |||| Sbjct 231993 TTCCAAGGTTCTTCTGATTGGATTTCCTGTTGCAGGCATCCTTGTACAGCATGTAGGGAG 231934 Query 69416 TACCAGTTTCAA--TCTGAGATTCGATAATAGATTTCCAAACGAC----CCTAGCATTTA 69469 | ||||| |||| | ||| ||| | ||| | | |||| | | || ||| | Sbjct 231933 TTCCAGTCTCAACTTGTGACATT--AGAATTGCTGTCCACAGCTCACGGGCTGGCACT-- 231878 Query 69470 TTACGGTCTTGTAACGCTTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTC 69529 | ||| ||||||||| ||| | || || | ||| || ||| |||||||| || | Sbjct 231877 TGACG--CTTGTAACGAGCCTCCTCCTCGTACTTTGTGTACAGCTTATCGAATTCCTCAC 231820 Query 69530 CCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACACATCATCAT 69589 ||||| ||| | || ||||| || | || |||||||| ||| | | || Sbjct 231819 CCCAAGTGTCACAGAGGCCTGGACACTCGTGGGGGCACATCAAACTCCAGGGACCGTCTG 231760 Query 69590 CCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTC 69649 |||| || |||||||| || | |||||| ||||| || || || || || | | || Sbjct 231759 CCTTGACACGTTTCATGAACAAATCGGGTATCCACAGGGCGTAGAACAGCTCACGTGCTC 231700 Query 69650 TATTTTCTTCATTTCCTG 69667 | ||| || ||||||| Sbjct 231699 GGTATTCCTCTTTTCCTG 231682 >seq320 Length=265502 Score = 95.1 bits (104), Expect = 2e-14 Identities = 142/201 (71%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 39668 AATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCA 39727 || ||||| |||||||| || ||||||||||| | ||| || |||||||| ||| ||| Sbjct 15444 AAAGTGAGACCAGGCATGAGTCCACGCTTTTTCAACCAGAAGATGGCAGCGAAACTACCA 15385 Query 39728 GAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTT---GTA 39784 || ||||| || || || || || || || || | ||||| || || | || || Sbjct 15384 GAGAAGAAAATTCCCTCGACAGCGGCGAAGGCGATTAGTCTTTCGGCGAACGTTGCAGTT 15325 Query 39785 TCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCT 39844 || || ||||| || ||||||| | |||||||||| |||||| || | | || Sbjct 15324 TCGTTTACAATCCAGTTGAGTGCCCAGTTAGCTTTCTTCGCTACACAGGGGAGATTCTCA 15265 Query 39845 ATAGCATTAAAGAGATAATGT 39865 || || || || | ||| ||| Sbjct 15264 ATCGCGTTGAATAAATATTGT 15244 >seq9 Length=4000459 Score = 86.0 bits (94), Expect = 9e-12 Identities = 221/327 (68%), Gaps = 11/327 (3%) Strand=Plus/Plus Query 163057 TACGAGCCAGGAAAACGTAGATGGCTTAAAATAAAGAAAGACTACTTGAACAATGGTTCA 163116 |||||||| |||||||| ||| | || ||||||| ||||||||| ||| || || Sbjct 868319 TACGAGCCCGGAAAACGCCACTGGTTAAAGGTAAAGAAGGACTACTTGTTCAACGGAGCA 868378 Query 163117 ATGGCAGACTCTGCAGATTTAGTAGTACTTGGGGCATATTATGGAAAAGGAATAAAGGGT 163176 ||||| || |||||| | || || ||||| || | || || | || | || ||| Sbjct 868379 ATGGCCGATAGCGCAGATCTCGTCGTGCTTGGCGCTTGGTACGGCACCGGCAACAAAGGT 868438 Query 163177 GGAATGATGGCTGTCTTTTTGATGGGTTGCTATGATGACGAGTCTGG-TAAATGGAAGAC 163235 ||||||||| | | || | ||||||||| | || | | | || ||||||| || Sbjct 868439 GGAATGATGTCGATTTTCCTCATGGGTTGCCACGA-CAAAACCCGGGATAAATGGGTCAC 868497 Query 163236 AGTAACTAAATGTTC----CGGACACGATGATAATACGTTA-AGGGTTCTACAAGACCAA 163290 ||| || || || | ||||||||| || ||| ||| || | | | || ||| || Sbjct 868498 AGTGAC-CAAGGTCCACGGCGGACACGACGACGCTACCTTAGAGCGAT-TGCAGGACGAA 868555 Query 163291 TTAAAGATGATTAAAATTAGTAAGGATCCaaaaaaaGTACCAGAGTGGTTGGTAGTTAAT 163350 | | ||||||||||| | || || | || || ||| | |||||| | || || Sbjct 868556 CTGGACATGATTAAAATCGGAAAAGACCAGAATCTGGTGCCAAACTGGTTGATTGTCAA- 868614 Query 163351 AAAATCTAT-ATTCCAGATTTTGTAGC 163376 ||| | || | ||||||||| |||| Sbjct 868615 CAAACCAATGGTCCCAGATTTTCTAGC 868641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686874729323520