Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq2351 167 3e-36 >seq2351 Length=10305 Score = 167 bits (184), Expect = 3e-36 Identities = 353/521 (68%), Gaps = 12/521 (2%) Strand=Plus/Minus Query 143073 GGACTGAACAGAGTTATGTATTCATCTTTGCCAAGACGTTCCATCATCAGGTCGTTGATT 143132 || |||||||| || || | || ||||| | || || | |||||| | ||| | Sbjct 3040 GGGCTGAACAGGGTGATTTCTTGTCCTTTGACCAGGCGCTGATACATCAGCTTGTTCAAC 2981 Query 143133 TGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTAAGT 143192 || | || || || |||||||| | ||||| | || ||||| ||||||||| || Sbjct 2980 TGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCCACGGTTGTTCTTCAGC 2921 Query 143193 ACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAATGTTGCGGCACCACCA 143252 || || || | || ||||| |||||||| | || || |||| ||||| || || || Sbjct 2920 ACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAACGTTGCCGCTCCGCCG 2861 Query 143253 CGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTGTTTCCAGAAAGGAATA 143312 || || ||||| || || |||||||| ||||| || ||||| ||||| ||||||||||| Sbjct 2860 CGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATGTTTATAGAAAGGAATA 2801 Query 143313 ACTCCAGTATGCTTGACTTCACCGTTTCCGATTTTTGAACCTTCTGCACGCAACATCCCC 143372 |||||||| ||||||| | || ||| ||||| | || Sbjct 2800 CAGCCAGTATGGAATGCTTCACCACCGCGAATCGGGCTACCCAGCGCACGAATACGACCG 2741 Query 143373 GCGTTAATGCCAATACCTGCACGCTTACTGATA--TACTCAATAATGCTTGCACTGGCTT 143430 ||||||||||| ||||| ||||||| ||| | || | | | | | ||||||| Sbjct 2740 GCGTTAATGCCGATACCGGCACGCT--GTGAAACGTATT---TCACGATAGCACTGGAGG 2686 Query 143431 T---GTTAATTGACTTAAGTGAGTCACCAGCTTCAATAACAACACAAGAGCTAAACTGAC 143487 | |||||| || | || ||| || ||||| | || || ||||| ||||||| Sbjct 2685 TGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGAGCTGAACTGAC 2626 Query 143488 GAGTCGGTGTACGAGCCCCGGCCATAATTGGAGTAGGCAAAGAAAT-TTGACGAGTAGAT 143546 | || || ||||| | |||| ||| || || || ||||| ||||| |||| | ||||| Sbjct 2625 GGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGGCAATGAAATCTTGAAG-GTAGAA 2567 Query 143547 ACGGCGTCATAAAAACGAATTACGTGCGCCAGGCGGTTTTC 143587 | |||||||| || || | |||| |||| || |||| Sbjct 2566 ATCGCGTCATAGAAGCGTTTGACGTAATCCAGACGCGTTTC 2526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544936169825280