Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027340.1 Length=162160 Score E Sequences producing significant alignments: (Bits) Value seq2351 159 4e-34 >seq2351 Length=10305 Score = 159 bits (176), Expect = 4e-34 Identities = 277/400 (69%), Gaps = 2/400 (1%) Strand=Plus/Minus Query 58355 GTTGATCTGAACACCGTAGTCAGTACGGCGCTCGCGGTTGTTCTCAATACCACGGTTGTT 58414 ||| | ||| || ||||| || | ||| |||||||| || | ||||||||||| Sbjct 2987 GTTCAACTGCACGCCGTAATCGAGGTGACGCACGCGGTTGCCTTCCACGCCACGGTTGTT 2928 Query 58415 CTTCAGCACGATCATGTCATCGAACTGGAAGTGCCACATCGGGTAATACATGGTTGCTGA 58474 ||||||||| | || | || | | | ||||||| ||||||| ||| ||||| | Sbjct 2927 CTTCAGCACCAGCAGGCTTTCCACTTCCAGATGCCACAGCGGGTAAAACAACGTTGCCGC 2868 Query 58475 GCCGCCACGGATACCACCCTGAGAACAGCTCTTCAGATCACCAACGAACTTCTTGATGAA 58534 ||||| || | ||| ||||| || ||| |||| | ||| | || ||| Sbjct 2867 TCCGCCGCGCACACCGCCCTGTGAGCAGGATTTCACTGCGGTCTGGAAATGTTTATAGAA 2808 Query 58535 CGGGATCGTACCGGTATG-AGTCATCTCACCGTCGCGGATAGAGGAACCCAGGGCACGGA 58593 || || || ||||| | | | ||||| |||| || | | |||||| ||||| | Sbjct 2807 AGGAATACAGCCAGTATGGAATGCT-TCACCACCGCGAATCGGGCTACCCAGCGCACGAA 2749 Query 58594 TAGCGCCGAAGTCAACACCGATACCAGCACGCTTAGACACGTATTTCACGATTGCGGTGC 58653 || ||| || || |||||||| ||||||| || |||||||||||||| || || Sbjct 2748 TACGACCGGCGTTAATGCCGATACCGGCACGCTGTGAAACGTATTTCACGATAGCACTGG 2689 Query 58654 CAGTAGCAGTAATGCTGTCCAGGGTGTCACCAGACTTGATCAGGACACATGAGCTGAACT 58713 || || ||||| |||||| |||| || ||| |||| || || |||||||||| Sbjct 2688 AGGTGGCGTTAATGGAATCCAGGCTGTCGCCGCACTCAATCAACACGCAGGAGCTGAACT 2629 Query 58714 GACGGGTACGGGTACGCACGCCTGCCATGATAGGTGTTGG 58753 ||||||| ||||||||||||| | |||||| || ||||| Sbjct 2628 GACGGGTTGGGGTACGCACGCCGGACATGATCGGCGTTGG 2589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518758268313600