Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027351.1 Length=147745 Score E Sequences producing significant alignments: (Bits) Value seq2955 338 6e-88 >seq2955 Length=1537 Score = 338 bits (374), Expect = 6e-88 Identities = 557/810 (69%), Gaps = 34/810 (4%) Strand=Plus/Plus Query 129169 AACGGGGCTTG-TGCTCCACTGGTCATATATACCGGGGTAACGCCATTCCACTTGTTAAT 129227 || |||| ||| ||| || |||||||||||| ||| ||||| |||||||| ||| Sbjct 460 AAAGGGGGTTGCTGCGCCGCTGGTCATATATTGCGGCAGTACGCCGTTCCACTTTCCAAT 519 Query 129228 GGCTTCCAGTTGCATGATCTCCGGGTTTTTACGCAGAGCATCACCACGCATCTGAATGGA 129287 || || ||||||| | || || ||||| |||| || || || || | ||| | Sbjct 520 CGCCTCAAGTTGCAACACTTCTGGATTTTTGCGCAATGCTTCGCCGCGTAGTGCAATCGC 579 Query 129288 TTCTGCTTCACCTTTAGCCAGTGCCACTTTAGCATCGGCCTCGCCCTGAGCTTGCAGACG 129347 || ||||| |||||||| || ||||| | Sbjct 580 ATCGGCTTCGGCTTTAGCCCGT--------AGCATTG----------------------- 608 Query 129348 CTTAGATTCAGCTTCGCCGCGAGCGGCTTCGATCTGTTTCTGAGCTTCAGCCTTGGTCTG 129407 | || || ||||| || ||||| |||||| ||| || |||||||| |||| || Sbjct 609 --TGGACTCCGCTTCTCCACGAGCCTGTTCGATGGCTTTTTGTGCTTCAGCTTTGGATTG 666 Query 129408 CTGGATTTCGTTCTCACGCAGCAGAGCTTTCTGAGTTGCTTCGATCTTCGCGTTGATTGA 129467 | |||||| || ||||||| | || ||| || |||||||| ||||||||||| || Sbjct 667 CGCGATTTCATTTTCACGCAATAAGGCGCGCTGGGTGGCTTCGATTTTCGCGTTGATGGA 726 Query 129468 CGCTGTTACCTGCGGTGGGTAAATCAGGTCATCGGTATATGACAGTTTTACAATCACAAT 129527 | || |||||| | ||||| |||||| | ||||||| ||||||||| || Sbjct 727 CTCTTTTACCTTTTGCGGGTAGTCCAGGTCGCTGACCCATGACAGCTTTACAATCCTGAT 786 Query 129528 ACCAATCGGATCAAGCTTGGACTTAAGCTGCTTGGTAACACGTTCAAGCAACTGACTCTT 129587 || || || || |||||||| || | | || || || | || || ||||| | || Sbjct 787 GCCGATAGGGTCGAGCTTGGATTTCAAGTCCTGTGTGACCAGCTCCAGTAACTGCGTTTT 846 Query 129588 ACCATCACCAGCCAGCGTACCAATGTCCATTGAGCCAGCTTCTTTGATCAAGGCATCCGA 129647 ||| | | || |||| || ||||| |||| | ||||||| || || Sbjct 847 ACCGCCTGCGGCGAGCGAGTTGATATCCATCTTTCCAGAGTGGTTGATCAGCGCGTCGCT 906 Query 129648 GATATTCTGTCGAATGTTTACATCAGTGATTTCCTGAACACCTTTGCGGTAGGTCTGGAA 129707 ||| ||||| || | ||| || || |||||||| | || || |||||||||||||| || Sbjct 907 GATGTTCTGGCGCAAGTTGACCTCGGTGATTTCGTCCACCCCCTTGCGGTAGGTCTGAAA 966 Query 129708 AATCTTCGTGACCTTGGAGCGATCAACAAAGTATTCAACACCGATTTTAGCGGATACCGT 129767 || || || ||||| |||| || | ||||| || ||||| || || Sbjct 967 TATTTTGGTCACCTTCTCCGGATCGACGTAATATTCGACGCCGATCCGGGCTTTCACATC 1026 Query 129768 CATCGAATCCTTGGTCTGGAAGTTGAACGGCTGCTCGTAGTTATTCAACTGGTTGAATGT 129827 ||| || || |||||||| |||| |||| |||||||| | | ||||||||| || Sbjct 1027 CATTGAGTCAGCAGTCTGGAAAGTGAATGGCTTGTCGTAGTTGTGTAGCTGGTTGAACGT 1086 Query 129828 CGGGAACTGATAAATCTCTTCGTTCCAGGTCAACCAATACTTACCAACACCAACTTCTTG 129887 || ||||| ||||| |||||||||||||| ||||| || ||||| || || ||||| || Sbjct 1087 TGGAAACTGGTAAATGTCTTCGTTCCAGGTTAACCAGTATTTACCCACGCCCACTTCCTG 1146 Query 129888 CTGCTGGACACCCTTTTCGTCACCATACAGGTCAACCTTTACGCCAACGTAACCCGCAGG 129947 ||||||||| || ||||||||||| || || || || ||||| ||||| || ||||| || Sbjct 1147 CTGCTGGACGCCTTTTTCGTCACCGTAGAGATCTACTTTTACACCAACATACCCCGCGGG 1206 Query 129948 CACGGTGGCACGTTCGCAACCAGTCAGGCC 129977 ||||||||| ||||||||||||||||| || Sbjct 1207 CACGGTGGCGCGTTCGCAACCAGTCAGCCC 1236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472632556262400