Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Diachasma_20alloeum_20[refseq_20GCF_5F001412515.1_202015-10-27] 3,968 sequences; 388,752,668 total letters Query= NC_027402.1 Length=240413 Score E Sequences producing significant alignments: (Bits) Value seq3839 102 1e-16 >seq3839 Length=10135 Score = 102 bits (112), Expect = 1e-16 Identities = 220/324 (68%), Gaps = 4/324 (1%) Strand=Plus/Minus Query 198329 CTTTCATGTCAGCTCTATCAACGCA-GTGCGGATTTTTTCCTCGGCGTGCCGTTCAACAT 198387 ||||| |||||||| || || ||| ||| | || | |||||||| |||||||||| || Sbjct 1408 CTTTCCTGTCAGCTTTACCAGCGCTCGTGTG-ATGTGTTCCTCGGTCTGCCGTTCAATAT 1350 Query 198388 CGCGTCTTACGCATTACTCGTGCACATGGTTGCCCAGCAG-GTTAACATGGTGCCGGGCG 198446 || ||| ||| | || ||||| ||| | || |||||| | | | || | ||| || Sbjct 1349 TGCCAGTTATGCACTGCTGGTGCATATGATGGCGCAGCAGTGCGACCTTGAAGTCGG-CG 1291 Query 198447 ATTTCATTTGGACGGGCGGTGACACACATCTCTACTCTAATCATCTGGAGCAGGCCAAGC 198506 | || | ||||| || |||||||| ||||| ||| || ||| |||||||| | | Sbjct 1290 ACTTTGTCTGGACCGGTGGTGACACCCATCTGTACAACAACCATATGGAGCAGACGCATT 1231 Query 198507 TCCAGCTGACGCGTGAGCCGTTACCTTTACCGAAACTGATCATCAAGCGTAAACCGGAAT 198566 | || |||| |||||||| | | | |||||| ||||||| || || || | | Sbjct 1230 TGCAACTGAGCCGTGAGCCAAAAGCGCTGCCGAAATTGATCATTAAACGCCGTCCTGCCT 1171 Query 198567 CTATCTTCGATTATAAATTCGAAGATTTTGAGATCGTTGGGTATCAGTCTCATGAAAAAA 198626 | | || || ||| | ||||| ||||| || || | || || | | ||| | Sbjct 1170 CGCTGTTTGACTATCAGTTCGATGATTTCGAAATAGAAGGCTACGATCCGCATCCTGCCA 1111 Query 198627 TATCTGCACCGGTGGCTATCTAAT 198650 | ||||||||||| || |||| Sbjct 1110 TCAAGGCACCGGTGGCGATTTAAT 1087 Score = 89.7 bits (98), Expect = 8e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 198095 CGCCGTATTATTGTCAGCGCATGGAACGTGGGTGAGTTGGATCAAATGGCGTTAGCTCCG 198154 |||||||| ||||| || ||||||||||||||||| |||||||||||| | || ||| Sbjct 1507 CGCCGTATCATTGTTTCTGCCTGGAACGTGGGTGAGTTAGATCAAATGGCGCTGGCACCG 1448 Query 198155 TGTCATGCGTTCTTTCAGTTCTAC 198178 || |||||||| || || |||||| Sbjct 1447 TGCCATGCGTTTTTCCAATTCTAC 1424 Score = 84.2 bits (92), Expect = 3e-11 Identities = 183/274 (67%), Gaps = 0/274 (0%) Strand=Plus/Minus Query 197613 TGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTTAAAGGCGATC 197672 ||||||| ||||| || |||||||||| | || || ||||| || || || Sbjct 1881 TGAAACAGTATCTGGAATTGATGCAGAAGGTGCTTGATGAGGGAACGCCGAAGGGAGACA 1822 Query 197673 GTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAAG 197732 | || || || || || | || | || || | |||||||||||| || ||| | | Sbjct 1821 GAACCGGCACCGGAACCTTATCGATTTTCGGCCACCAGATGCGTTTCAATCTGCAAGACG 1762 Query 197733 GTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGCTGT 197792 |||| ||| | || || || ||| ||| ||||| || || || || || ||| ||| Sbjct 1761 GTTTTCCGCTGGTGACCACCAAGCGCTGCCATCTGCGCTCAATCATTCACGAGCTGTTGT 1702 Query 197793 GGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGGC 197852 ||||||| | || || |||||| |||||| | || || |||| ||||||| Sbjct 1701 GGTTCCTCAACGGTGACACCAACGTTGGCTATCTGCACGACAATAAAGTTAGCATTTGGG 1642 Query 197853 GGGAGTGGCAAGATGAAAATGGGAACCTTGGCCC 197886 || ||| ||||| ||||| | ||||| || Sbjct 1641 ATGAATGGGCCGATGAGAATGGCGATCTTGGGCC 1608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 769155447997440